Transcript Information: S_Transcript_194580.p1


Annotated TAIR IDAT1G32410.1
Annotated Gene NameVacuolar protein sorting 55 (VPS55) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:11694398-11695297 | Forward length=140
E-Value1.8E-67
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.339936658316
Replicate 220.644467371675
Replicate 323.053420104501
Condition 2: 8 Hour
Replicate 133.206679208107
Replicate 227.485414043093
Replicate 328.015113995118
Condition 3: 24 Hour
Replicate 122.312988136821
Replicate 223.635117786762
Replicate 322.159367584495


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_194580.p1 GENE.S_Transcript_194580~~S_Transcript_194580.p1 ORF type:complete len:140 (+),score=15.52,Vps55|PF04133.10|4.8e-35 S_Transcript_194580:393-812(+)
ATGGCAGATTTACCTCGTTACATGTTGGCATGTGTGCACAGTGGGAAGCTTGCTTTCCTGGCAATTTTGGTGTCCGGAGGAATTGTTTTGCAAATATTGGCATGTGCTTTGTACAACAACTGGTGGCCGATGTTAACAGTTATAATGTATGTCCTTCTCCCTATGCCTATGTTGTTTTTTGCCGGGTCTGATACCTCTTCACTGTTTACTGAATCATCTGGTAACAGCTGGTTGGAAGCGGCCAAGTTCTTAACAGGAGCTTCAACAGTAGGCAGTATTGCCATTCCGGCTATCCTAAAACACGCTGGTATAATTGGCTGGGGAGCCCTAGCGATGGAGCTTTCTTCTTTTTTTGTATTTGTTTTGGCCATTTTGTGCTTCATCAATATGAACAATGATGATGATTATAATTTTCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_194580.p1 GENE.S_Transcript_194580~~S_Transcript_194580.p1 ORF type:complete len:140 (+),score=15.52,Vps55|PF04133.10|4.8e-35 S_Transcript_194580:393-812(+)
MADLPRYMLACVHSGKLAFLAILVSGGIVLQILACALYNNWWPMLTVIMYVLLPMPMLFFAGSDTSSLFTESSGNSWLEAAKFLTGASTVGSIAIPAILKHAGIIGWGALAMELSSFFVFVLAILCFINMNNDDDYNFL*

Click here to download the sequence:
Link to NCBI Protein BLAST