Transcript Information: S_Transcript_194587.p1


Annotated TAIR IDAT3G11530.1
Annotated Gene NameVacuolar protein sorting 55 (VPS55) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:3628801-3629885 | Reverse length=113
E-Value1.6E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6031928454928
Replicate 20.79745022497041
Replicate 30.22220163956145
Condition 2: 8 Hour
Replicate 12.0554593076755
Replicate 21.3477017252847
Replicate 30.77045232307162
Condition 3: 24 Hour
Replicate 11.3159568367828
Replicate 22.1844637663949
Replicate 30.91164015922106


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_194587.p1 GENE.S_Transcript_194587~~S_Transcript_194587.p1 ORF type:complete len:83 (+),score=4.19 S_Transcript_194587:394-642(+)
ATGTGTGCACAGTGGGAAGCTTGCTTTCCTGGCAATTTTGGTGTCCGGAGGAATTGTTTTGCAAATATTGGTTTGCATGAATTTTTTTTGATTTTTTCATGGTTGCATTTGAAGATATTATTGCAGCTTTTGATCATTATCTGTCTGCTATTGGCAGGCATGTGCTTTGTACAACAACTGGTGGCCGATGTTAACAGTTATAATGTATGTCCTTCTCCCTATGCCTATGTTGTTTTTTGCCGGGTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_194587.p1 GENE.S_Transcript_194587~~S_Transcript_194587.p1 ORF type:complete len:83 (+),score=4.19 S_Transcript_194587:394-642(+)
MCAQWEACFPGNFGVRRNCFANIGLHEFFLIFSWLHLKILLQLLIIICLLLAGMCFVQQLVADVNSYNVCPSPYAYVVFCRV*

Click here to download the sequence:
Link to NCBI Protein BLAST