Transcript Information: S_Transcript_194924.p1


Annotated TAIR IDAT4G18750.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)DOT4
Annotation TypeHomolog
Chromosome Positionchr4:10304850-10307465 | Forward length=871
E-Value1E-123
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0389459941662
Replicate 20.9938193494376
Replicate 30.91382926540363
Condition 2: 8 Hour
Replicate 11.9212063348768
Replicate 21.7131595805196
Replicate 32.1763928485567
Condition 3: 24 Hour
Replicate 10.65600250722505
Replicate 20.81671393067918
Replicate 31.1739990639018


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_194924.p1 GENE.S_Transcript_194924~~S_Transcript_194924.p1 ORF type:complete len:666 (+),score=119.28,PPR_2|PF13041.2|3.4e-06,PPR_2|PF13041.2|0.12,PPR_2|PF13041.2|0.011,PPR_2|PF13041.2|3.9e-07,PPR_2|PF13041.2|0.0012,PPR_2|PF13041.2|3.3e-09,PPR_2|PF13041.2|1.1e+04,PPR_2|PF13041.2|4.5e+03,PPR|PF01535.16|0.025,PPR|PF01535.16|1.2e+04,PPR|PF01535.16|0.062,PPR|PF01535.16|1.4e+04,PPR|PF01535.16|0.068,PPR|PF01535.16|3.5e-06,PPR|PF01535.16|0.0026,PPR|PF01535.16|9.9e-08,PPR|PF01535.16|4.7e+02,PPR|PF01535.16|87,PPR|PF01535.16|1.1e+04,PPR|PF01535.16|3.6e+02,PPR|PF01535.16|6.1e+03,DYW_deaminase|PF14432.2|2.4e+03,DYW_deaminase|PF14432.2|1.2e-29,PPR_3|PF13812.2|0.042,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|2.3e+03,PPR_3|PF13812.2|0.18,PPR_3|PF13812.2|0.27,PPR_3|PF13812.2|0.0064,PPR_3|PF13812.2|10,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|94,PPR_1|PF12854.3|5e+02,PPR_1|PF12854.3|16,PPR_1|PF12854.3|3.5,PPR_1|PF12854.3|7.2,PPR_1|PF12854.3|0.054,PPR_1|PF12854.3|1e+03,PPR_1|PF12854.3|6.5e+02,PPR_1|PF12854.3|6.4e+03 S_Transcript_194924:191-2188(+)
ATGGAAGCACTTACGTTTCCACAGTCATCTCCATGCTTGAGGTTGCAATCTCAGAGATACTTTTATGCAAGGGATCATGCCAGGAGTAATTTTCATTCTCGAATTCATATGCGAGTGGCATCCAAGTTGGAAGAACTGACAGTGACTCGCCAACCTGTGCTTGATAAAATGCCTACAACAGATACCTTTGCTTGGAACCATTTGATTCGAACACACCTTGCTAATGGCGAGCTTGATAGTGTCATGCACGTATATCAGGAAATGCTGATGCAAGGTGTTCGTCCTGATAAGCACACTCTCCCGCGTATTTTGGCTGCTTCTCGCCTTTCAAATTCCTTGTTCCTTGGGAAACAGGTTCACTGTCATGCTGTTAAACTAGGTGTTTCTTCTGAGGATTATGTGATTACTGCCTTGATGAAAATGTATGGCCATTTAGATGGTGCCAATACAGTAAAACAGATCTTTGATAAGTCAAGCATCGGAAAAAGTTCTATATCAGGGACCTTGCTAATTTCAATGTACTTGAAGGAAAATAAACCCAGGTTGGCTATTGATATGTTCTATAAAATTGTCAGTTCAGGTGTCGAGATTGATGCAGTTGCAATAATGACTGCAATAGGGGCTTGTGGAATGCTGAAATCCCTTGAAGATGGGCGAAAGGTGCATGGGATCGCTAAGGTCAACGGACTGCAATCTCATATCTTGGTTTGTAATTCTCTGTTGAAAATGTACTTGGATTGTGGAAGCATTAAGGATGCTCGCGATGTGTTTGACAATATGTCGTCTAGAGATTCCATCTCTTGGACAGAAATGATTCGTGGGTATGTGAAGAGTGGTGGGTTCAATGAAGGCATCAAATTGTTCAAGAAAATGGTATCCGAGGGCATTCAACCTGATCCACCTGCAGTTGCTAGCATTCTACCAGCTTGTGCGAGGATGACAGCGCATAAGCAAGGCAAAGAAATTCATGGTTACTTGATTAGGAATGGTGTTGACATGAATGTTACGGTCCAGAATGCTTTGTTGGATATGTATGTAAAATCAGGGTCCATGGAATTGGCTTCTAGAATTTTCCATGAGATGACTACTAAAGATAGTGTTTCATGGACAATTATGATCCATGGTTACAGTCTCCATGGCCAAGGAAGAAAAGGGGTTGAATTGTTCCATGAAATGCAGAAAAATAATCTTGTAATTGATGAGGTCACATATGCTTCTGCCCTTCATGCTAGTGTCGTGGCAAATTTGGTTGAGGAAGGCAAGACTTTATTTAGCCTCATTAGGAGACCTGAAGTAAGACATTATGCTTTGATGGTTTTGCTTCTATCCCGTGCTGGACTTTTTGATGAGGCAAAGGTCTTCATTGAGAAAAACCGAATTGGACAGCAGGCAGAGGTGGCAAGAGCTCTATTAGACGGATGCAGGATTCATCGAAATGCAAAAGCTGGTAAGAAACTTATTGAGCAGCTCTGTGATTTAGAACCACTTAATGCTGACAACTATGTTCTGTTGTCAAATTGGTATGCTAGCAATTCAAAATGGGACATGGTAGACAAGTTGAGAGAAACAATCAGAGACATGGGTTTGTCACCTAGGAGAGGTTATAGCTGGATAGAGTTCCACAATAAAATTCATGTATTTGGGACTGGGGATCTGTCCCACCCAAGATCTGAAAAACTGTACTGGGAATTGCAATGTTTGGTAAAGAAAATGGAGGAAGAGGGCCATAAATTTGACTCGGACTTCAGTCTCCATGACGTGGATGAAGAGAGAGAATGCACTATGACAGGGCACAGTGAATTGCTGGCTATATCTTTTGGCCTAATTAGTAACCAGGAGACCACTATCCGTGTTACGAAAAACCTTCATGTTTGTCGCAACTGCCATGATATGGCAAAAGTTATATCAAGACTAGTTGCTCGTGAGATCATCATAAAGGATCCGAATAGTTTCCACCATTTTAAGGATGGACATTGTTCTTGTGGGGACTTCTGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_194924.p1 GENE.S_Transcript_194924~~S_Transcript_194924.p1 ORF type:complete len:666 (+),score=119.28,PPR_2|PF13041.2|3.4e-06,PPR_2|PF13041.2|0.12,PPR_2|PF13041.2|0.011,PPR_2|PF13041.2|3.9e-07,PPR_2|PF13041.2|0.0012,PPR_2|PF13041.2|3.3e-09,PPR_2|PF13041.2|1.1e+04,PPR_2|PF13041.2|4.5e+03,PPR|PF01535.16|0.025,PPR|PF01535.16|1.2e+04,PPR|PF01535.16|0.062,PPR|PF01535.16|1.4e+04,PPR|PF01535.16|0.068,PPR|PF01535.16|3.5e-06,PPR|PF01535.16|0.0026,PPR|PF01535.16|9.9e-08,PPR|PF01535.16|4.7e+02,PPR|PF01535.16|87,PPR|PF01535.16|1.1e+04,PPR|PF01535.16|3.6e+02,PPR|PF01535.16|6.1e+03,DYW_deaminase|PF14432.2|2.4e+03,DYW_deaminase|PF14432.2|1.2e-29,PPR_3|PF13812.2|0.042,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|2.3e+03,PPR_3|PF13812.2|0.18,PPR_3|PF13812.2|0.27,PPR_3|PF13812.2|0.0064,PPR_3|PF13812.2|10,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|94,PPR_1|PF12854.3|5e+02,PPR_1|PF12854.3|16,PPR_1|PF12854.3|3.5,PPR_1|PF12854.3|7.2,PPR_1|PF12854.3|0.054,PPR_1|PF12854.3|1e+03,PPR_1|PF12854.3|6.5e+02,PPR_1|PF12854.3|6.4e+03 S_Transcript_194924:191-2188(+)
MEALTFPQSSPCLRLQSQRYFYARDHARSNFHSRIHMRVASKLEELTVTRQPVLDKMPTTDTFAWNHLIRTHLANGELDSVMHVYQEMLMQGVRPDKHTLPRILAASRLSNSLFLGKQVHCHAVKLGVSSEDYVITALMKMYGHLDGANTVKQIFDKSSIGKSSISGTLLISMYLKENKPRLAIDMFYKIVSSGVEIDAVAIMTAIGACGMLKSLEDGRKVHGIAKVNGLQSHILVCNSLLKMYLDCGSIKDARDVFDNMSSRDSISWTEMIRGYVKSGGFNEGIKLFKKMVSEGIQPDPPAVASILPACARMTAHKQGKEIHGYLIRNGVDMNVTVQNALLDMYVKSGSMELASRIFHEMTTKDSVSWTIMIHGYSLHGQGRKGVELFHEMQKNNLVIDEVTYASALHASVVANLVEEGKTLFSLIRRPEVRHYALMVLLLSRAGLFDEAKVFIEKNRIGQQAEVARALLDGCRIHRNAKAGKKLIEQLCDLEPLNADNYVLLSNWYASNSKWDMVDKLRETIRDMGLSPRRGYSWIEFHNKIHVFGTGDLSHPRSEKLYWELQCLVKKMEEEGHKFDSDFSLHDVDEERECTMTGHSELLAISFGLISNQETTIRVTKNLHVCRNCHDMAKVISRLVAREIIIKDPNSFHHFKDGHCSCGDFW*

Click here to download the sequence:
Link to NCBI Protein BLAST