Transcript Information: S_Transcript_19498.p1


Annotated TAIR IDAT3G49900.2
Annotated Gene NamePhototropic-responsive NPH3 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:18500635-18502614 | Reverse length=520
E-Value1.2E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.0113572659257
Replicate 26.1250803870721
Replicate 35.0155882833588
Condition 2: 8 Hour
Replicate 16.4640701527854
Replicate 25.6404944162483
Replicate 34.4080931307752
Condition 3: 24 Hour
Replicate 14.7650312429908
Replicate 24.4942402559329
Replicate 34.7871868984215


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_19498.p1 GENE.S_Transcript_19498~~S_Transcript_19498.p1 ORF type:5prime_partial len:353 (+),score=61.59,NPH3|PF03000.10|5.1e-08 S_Transcript_19498:1-1059(+)
AACGTTTTTCATTCCTGCTTGTCTTTGCTCCCTGAGGCGGAGCACACAGCGTTTCTTGCTAGCAGGTGTCTTGAAGCTCTCTTCTCGTTTGATGGTAGCAATGATGATGATGAGGAGGACGATGAGAATGGTTTAGCTAGTTGTGCTGATGGACTTAAGACAGTTTCACCGGAGAATTTTAGAGTCATTGCTGATTCCATGCAAAGAAGGCTTACAGCAAGTCATGATCTTCTGTATAGAGTGGTTGACCTTTACTTTCTGGTGTGCACTGGGAAGATAACGGAAGAGCAGAGGAGTCAAATATGCAGCTGCATAGACTGCGGCATTCTGTCATCTTCACTCCTGTTGCACGCCGTCCAGAACCCCCGTATGCCCTTACGCTTCATAGTCCAAGCCATGCTCATTGAGCAGCTAAACAGTCACCGCTCCATCTTCTCTGCCCTCAACACCGCCACTGCCACCACCATTACAGCACCCAGGCCTCAGCCTCAGCCTCGCGTCAAGGCCTCATCCCCGGCCACATTGGGAGCCATCCTGGAGCAGGATGCTGCCCTCCGCCAGGTGGCCAAGCTGCGAGCCACCATCGACACCACCAGCTCCAGGATCCAAACACTTGAGAGGGAACTCACCGGGATGAAACAGCTTTTATTGGAGACAGAGAAACACAAACAGAACCACAAAAACAACAGTCTGCTGGTGTTGGACCAGCCTGCAGGGAGGTCTTCGAGTTGTCGTTTCAGCAGTAATGTTAGTAACAAGGTAGAGAGAGGCGAGAGAGGGTCCGTTTCTTCGAGCATGTTGAGGTTCCGGGATCCGAAATTGGAGAATGATCAGACTGTAATCAGTCCTAGGATTGTCAAGAGGAATTTCGGGCAACGGTTGATTAGGGGATTGAAAACCGCATTTGGGGCTTCTTCTAAGGCCAAGGATCATAGGATTGGAAAAGCAGAGCAAATGGGAGTTAATAATGGTGATGAAAATGATGGAGTGAGTAAGATATTGCAAGTAGTCCATAGTGATAGTGCTAATCCTCACCATAGGAGTCATTCTGTTAGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_19498.p1 GENE.S_Transcript_19498~~S_Transcript_19498.p1 ORF type:5prime_partial len:353 (+),score=61.59,NPH3|PF03000.10|5.1e-08 S_Transcript_19498:1-1059(+)
NVFHSCLSLLPEAEHTAFLASRCLEALFSFDGSNDDDEEDDENGLASCADGLKTVSPENFRVIADSMQRRLTASHDLLYRVVDLYFLVCTGKITEEQRSQICSCIDCGILSSSLLLHAVQNPRMPLRFIVQAMLIEQLNSHRSIFSALNTATATTITAPRPQPQPRVKASSPATLGAILEQDAALRQVAKLRATIDTTSSRIQTLERELTGMKQLLLETEKHKQNHKNNSLLVLDQPAGRSSSCRFSSNVSNKVERGERGSVSSSMLRFRDPKLENDQTVISPRIVKRNFGQRLIRGLKTAFGASSKAKDHRIGKAEQMGVNNGDENDGVSKILQVVHSDSANPHHRSHSVS*

Click here to download the sequence:
Link to NCBI Protein BLAST