Transcript Information: S_Transcript_195013.p1


Annotated TAIR IDAT1G12300.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:4184163-4186076 | Reverse length=637
E-Value8E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.41910238165639
Replicate 20.69489100968551
Replicate 30.14521839435906
Condition 2: 8 Hour
Replicate 11.8470810510903
Replicate 22.1138754620214
Replicate 31.1748892380698
Condition 3: 24 Hour
Replicate 10.3440139132377
Replicate 20.53536562778773
Replicate 30.79439509937373


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_195013.p1 GENE.S_Transcript_195013~~S_Transcript_195013.p1 ORF type:3prime_partial len:127 (+),score=17.00,PPR_1|PF12854.3|4.8e-09,PPR_1|PF12854.3|0.00023,PPR_2|PF13041.2|1.3e-12,PPR|PF01535.16|1.6e+03,PPR|PF01535.16|3.4e-06,PPR|PF01535.16|0.017,PPR_3|PF13812.2|1.3e+04,PPR_3|PF13812.2|0.00025,PPR_3|PF13812.2|47 S_Transcript_195013:457-834(+)
ATGGCCTCTTTGTGTCCCCTGCCTTCCATCATTTATTTCAATCACCCCTTTTCTTCCATTCTCAAGACCAAGACACTCCCTAACGAATTTGATGACAAATACCACCTTGTCATTTCTCTCTTCAAACAGCTTGGCTTGCCAGGTTATGGTGTCCGTCTTCGTCTTCGTCCTGATGTTTATTCCTTTAACATCCTCATCAATTGTTACTGCCGCTTGGGCCGTGTTGATTTGGGGTTTTCCCTTCTGGGTACTCTTATTAAGCTTGGGTTTCAACCTAATTGTGTCACCTTTACAACCTTACTTGATGGCTTCATCCACCATGATCAAATCCCCAAGGCTCTCTCCTTTCTCGACACCCTTGTCAATCAACAAGGCTTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_195013.p1 GENE.S_Transcript_195013~~S_Transcript_195013.p1 ORF type:3prime_partial len:127 (+),score=17.00,PPR_1|PF12854.3|4.8e-09,PPR_1|PF12854.3|0.00023,PPR_2|PF13041.2|1.3e-12,PPR|PF01535.16|1.6e+03,PPR|PF01535.16|3.4e-06,PPR|PF01535.16|0.017,PPR_3|PF13812.2|1.3e+04,PPR_3|PF13812.2|0.00025,PPR_3|PF13812.2|47 S_Transcript_195013:457-834(+)
MASLCPLPSIIYFNHPFSSILKTKTLPNEFDDKYHLVISLFKQLGLPGYGVRLRLRPDVYSFNILINCYCRLGRVDLGFSLLGTLIKLGFQPNCVTFTTLLDGFIHHDQIPKALSFLDTLVNQQGF

Click here to download the sequence:
Link to NCBI Protein BLAST