Transcript Information: S_Transcript_195036.p1


Annotated TAIR IDAT1G52140.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16330.1); Has 114 Blast hits to 114 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:19407559-19408185 | Reverse length=208
E-Value7E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0596103579089
Replicate 23.2408617429118
Replicate 33.4384762189764
Condition 2: 8 Hour
Replicate 15.9036391273419
Replicate 28.2156506304081
Replicate 35.0579977367752
Condition 3: 24 Hour
Replicate 110.860733034872
Replicate 28.8350451907795
Replicate 36.5548815968098


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_195036.p1 GENE.S_Transcript_195036~~S_Transcript_195036.p1 ORF type:5prime_partial len:177 (-),score=23.14,DUF761|PF05553.7|7.1e-07 S_Transcript_195036:205-735(-)
GCCTTCTTCATGCTTAAAAGAGGCATAGGCAAGAAGAAAATGCTACTGGAGCTCAACATGATGATGAAGCGAGGTAAATTTGCTAGAAAAGCCCTTGGCAACTTCATGTTCCATCACAACAACAAAACCAATACCACCTTCCATGGTACCGTGGGCCCTGACCCGACCCAGATTGATCAGTTTGTCCCTAGGCCCGGGGATTATGAGTTCAGCTGCAAAAGCACCCCTTTATACCGCCAATACTTCAATAAAAGGAAAAACTACCACCACCAAAATAACTTGCCCTCGTACTTAAGTCGTGGCTACTATGATGATTATGATATAATTGATAACAATGTGAATTTGGAGTCGGTGAACAAGGTGCTGGAAATGATGATTTATAACAGTGATGAGATTACTGGTCGGAGCCCCTTGGTCCGGAAGCTAAGGATAACGGACTCACCGTTACCATTTCAGGAGGATAGTCATGTGGATGAGGCTGCTGAGGAGTTTATCAAGAGGTTCTACTCCCAGCTTAGACAACAATATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_195036.p1 GENE.S_Transcript_195036~~S_Transcript_195036.p1 ORF type:5prime_partial len:177 (-),score=23.14,DUF761|PF05553.7|7.1e-07 S_Transcript_195036:205-735(-)
AFFMLKRGIGKKKMLLELNMMMKRGKFARKALGNFMFHHNNKTNTTFHGTVGPDPTQIDQFVPRPGDYEFSCKSTPLYRQYFNKRKNYHHQNNLPSYLSRGYYDDYDIIDNNVNLESVNKVLEMMIYNSDEITGRSPLVRKLRITDSPLPFQEDSHVDEAAEEFIKRFYSQLRQQY*

Click here to download the sequence:
Link to NCBI Protein BLAST