Transcript Information: S_Transcript_19530.p2


Annotated TAIR IDAT3G48380.3
Annotated Gene NamePeptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:17916468-17920099 | Forward length=653
E-Value1.7E-171
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.6100886349113
Replicate 27.0658607079623
Replicate 37.8954196959205
Condition 2: 8 Hour
Replicate 110.174859432358
Replicate 28.0421678116664
Replicate 310.518604537099
Condition 3: 24 Hour
Replicate 17.638570370894
Replicate 27.7767980899231
Replicate 36.3467235921371


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_19530.p2 GENE.S_Transcript_19530~~S_Transcript_19530.p2 ORF type:complete len:306 (+),score=61.13,Peptidase_C78|PF07910.9|4.9e-53 S_Transcript_19530:2125-3042(+)
ATGAAACATGCAATCTCACCATCTTTCTTGAATCAACATCCCCAGCTACGTCCATATCACTTTTGTCCTCCAGGGATGTTGCACCCGATAACAGTTATTTACGAGTTGAGTTATGGAGAGACAGAACTGAAACAAGTTGATGTTAGGAGGTCCCTTCATCTTCGACTTGGTTTACCATCTGACCGTCCTCTCCTCCGCGTTGCCAATGCCCTAAGTTTGGCAAAGTTCAGTTCTAATGAAAGGGTTTCAGCAAAGAAGGGTTATCAGTTGCTGAGGGACGTACATATTGGCATTCCTAGCAGTGGAGTATCAGGAGGTCATGTATCTGTGGTTCAAGGCTCTTATGAATATCACCATTACCTTCAGGATGGTTTTGATGATTCGGGGTGGGGATGTGCTTACCGCTCTTTACAAACTATTATCTCCTGGTTTAGACTTCAACACTATACTTCAATTGATGTTCCAACACATAGGGAGATACAACAGGCACTTGTAGAGATTGGTGATAAAGATCCATCTTTCATTGGATCTCGTGAGTGGATTGGTGCCATTGAGTTAAGCTATGTTCTGGACAAACTTTTGGGCGTTACCTGCAAGGTTATCAACGTAAGATCTGGATCTGAGCTTCCTGAAAAATGTCGAGAGTTGGCCTTGCATTTCAAGCAGCAAGGAACACCCATCATGATTGGTGGTGGTGTTCTTGCATACACTCTTTTAGGAGTTGACTACAATGATGCAAGTGGGGATAGCGCATTCTTGATCCTGGATCCTCATTACACTGGCAGTGAAGATCTGAAGAAAATTGTAAACAGTGGTTGGTGTGGGTGGAAAAAGGCGGTTGACAGCAAGGGTAAAAATTTCTTCTTGCATGACAAGTTCTACAATCTTTTGTTGCCACAAAGACCAAACATGGTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_19530.p2 GENE.S_Transcript_19530~~S_Transcript_19530.p2 ORF type:complete len:306 (+),score=61.13,Peptidase_C78|PF07910.9|4.9e-53 S_Transcript_19530:2125-3042(+)
MKHAISPSFLNQHPQLRPYHFCPPGMLHPITVIYELSYGETELKQVDVRRSLHLRLGLPSDRPLLRVANALSLAKFSSNERVSAKKGYQLLRDVHIGIPSSGVSGGHVSVVQGSYEYHHYLQDGFDDSGWGCAYRSLQTIISWFRLQHYTSIDVPTHREIQQALVEIGDKDPSFIGSREWIGAIELSYVLDKLLGVTCKVINVRSGSELPEKCRELALHFKQQGTPIMIGGGVLAYTLLGVDYNDASGDSAFLILDPHYTGSEDLKKIVNSGWCGWKKAVDSKGKNFFLHDKFYNLLLPQRPNMV*

Click here to download the sequence:
Link to NCBI Protein BLAST