Transcript Information: S_Transcript_195520.p1


Annotated TAIR IDAT1G12860.1
Annotated Gene Namebasic helix-loop-helix (bHLH) DNA-binding superfamily protein
Annotated Gene Symbol(s)SCRM2, ICE2
Annotation TypeHomolog
Chromosome Positionchr1:4384758-4386392 | Forward length=450
E-Value1E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.53226002470361
Replicate 20.14708526371677
Replicate 30.12295157389067
Condition 2: 8 Hour
Replicate 10.56867707512355
Replicate 20.59658263039271
Replicate 30.42631695209963
Condition 3: 24 Hour
Replicate 10.58253022641584
Replicate 20.15109207717565
Replicate 31.1770287389054


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_195520.p1 GENE.S_Transcript_195520~~S_Transcript_195520.p1 ORF type:internal len:150 (+),score=16.91,HLH|PF00010.22|4.1e-08 S_Transcript_195520:3-449(+)
ACTATAAGTTTCGATGAGCATTGCTTTAAACCAACCCTTGACAAGAGCACACATAGTTATCCATCAACCCTGAATCAACCCCAAATCCTGCCTAGGTGTCAACCCGTAACCCAAATCATCCATCACTGCAGGCATCCTACTTTTGATGGGTCCTCCACTAACTCTTTTGCTTCAGATGAGCACACTTCTCCTGAGTCCAACCCTTGTCCTGTTTCCCCAAGCCTACCTGTAAACATATGTGGTTCTGGTAAGGAAGATCATGTCGTTGAAAGGGGGAGGCTCGACAGTAACCAGAAACCAAAGAAAGAGCATTGCAAATCGAAGAATCTGTTGACTGAGAGAAACAGGAGAGCCAGGATTAAAGGAGGCATGTTTGCCCTTCGTGCTTTGGTGCCTAATATCACCAAGATGGATAAGGCCGCAATTCTAGGAGACGCGATTGATTAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_195520.p1 GENE.S_Transcript_195520~~S_Transcript_195520.p1 ORF type:internal len:150 (+),score=16.91,HLH|PF00010.22|4.1e-08 S_Transcript_195520:3-449(+)
TISFDEHCFKPTLDKSTHSYPSTLNQPQILPRCQPVTQIIHHCRHPTFDGSSTNSFASDEHTSPESNPCPVSPSLPVNICGSGKEDHVVERGRLDSNQKPKKEHCKSKNLLTERNRRARIKGGMFALRALVPNITKMDKAAILGDAIDY

Click here to download the sequence:
Link to NCBI Protein BLAST