Transcript Information: S_Transcript_19560.p1


Annotated TAIR IDAT3G55090.1
Annotated Gene NameABC-2 type transporter family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:20416342-20418552 | Reverse length=736
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 161.953922230286
Replicate 279.740377849674
Replicate 370.424480125684
Condition 2: 8 Hour
Replicate 154.545991631054
Replicate 253.854813056116
Replicate 352.372808362777
Condition 3: 24 Hour
Replicate 165.4759276667
Replicate 255.776127683188
Replicate 353.156136595728


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_19560.p1 GENE.S_Transcript_19560~~S_Transcript_19560.p1 ORF type:complete len:744 (+),score=42.70,ABC2_membrane|PF01061.20|2.8e-38,ABC2_membrane|PF01061.20|1.1e+03,ABC_tran|PF00005.23|2.8e-26,AAA_21|PF13304.2|0.21,AAA_21|PF13304.2|0.074,AAA_29|PF13555.2|2e-05 S_Transcript_19560:175-2406(+)
ATGGATGTCCCATGGATGAACCAAGAAATGGCAAAAAAGGTCAATAGTTTCAGATCAACTTCTATTATGCCTTACTTTGATCCTATGGACCTTGAAGCCTCAAATCCAAACAACACCAACAGTACTGATGTGTCTATCTTACCCACTCTCGGAAAACTCCTCAAGAATGTGGGCGACGTTCATAAGGAAGCTACGGGCGACGAAACTCCGCAACACCTTGCGCTTCTGCCGTCTCCCGAGACTTTTGTCCTCCGTTTCTTTAATCTCACCTACAACGTCAAAATCAGTCGTAAACTTATCTTCTCTGACGATCAAGATGGCCGCGGTGTCGGCGTCTTCTCCCGTACCAAGACGCTGTTAAACGACGTCTCCGGGGAAGTGCGTGACGGAGAGATTATGGCAGTTATGGGGGCGAGTGGTGCGGGAAAATCGACTTTGATTGATGCCATGGCGAATCGGATTGCTAAGGGGAGTCTTAAGGGGAAGATCACTCTAAATGGTGAACCTCTTGAATCGAGGCTATTGAAGGTTATCTCTGCTTATGTTATGCAAGATGATTTGCTCTTTCCTATGTTGACTGTTGAAGAAACTCTTATGTTTGCTGCTGAGTTTCGCCTTCCTAGGAAGTTGTCCAAGTCCAGGAAAAAGGCCCGTGTTCAGCAGCTTATAGATCAGCTGGGTCTTCGGAATGCGGCGAAAACTATCATCGGTAACGAGGGTCACCGTGGAGTCTCCGGCGGGGAGCGCCGGAGGGTTTCCATTGGGATTGATATTGTGCATGATCCTATTATATTGTTTTTGGATGAACCCACTTCTGGACTTGACTCTACTAGTGCCTTTATGGTGGTTAAGGTGCTACAAAAGATTGCACAAAACGGGAGTATTGTTATAATGTCCGTCCACCAGCCGAGCTATCGTATCTTGGGATTGTTGGATAGGCTTATGATTTTGTCCCAAGGGCAGACCGTGTTTAATGGTCCGCCCTCGGTGCTGTCAGATTACTTTGCTGAGTTTGGGCACCCGATACCTGAGAATGAGAACCGAACAGAGTTCGCCATGGACCTGATTCGGGAGCTGGAGGACACACCCGAAGGGCCCGAGGCGCTGGTGGACTTCCAACGACAGTGGCAGTGCAAACAGGGGAGCTCAGCCCCTGCCATCGAGGGCGCCCCGCATCATAGCGGGGGCAGGCTGTCCCTGAAGGAGGCTATCAGCGCAAGCATCTCCCGAGGGAAGCTGGTGTCGGGCGCCACCAACATCGATGCAAGCCCATCTTCTATGGTTCCAACATTCGCCAACCCATTCTGGGTGGAGATCGCAACGTTGTCGCAGAGGGCGATGATGAACTCACGCCGAATGCCGGAGCTTTTCGGCATCCGGCTTGTTGCCCTTCTGGTCACCGGTTTTATCCTCGCCACCATATTCTGGAAGCTCGATAACTCCCCGAAGGGAGTTCAAGAAAGGATGGGGTTCTTCGCATTCGCAATGTCAACAACATTCTACATTTGCGCAGATGCTCTGCCAGTCTTCCTCCAAGAAAGATACATCTTCATGAGAGAAACAGCCTACAACACATACCGCAGATCATCCTATGTCCTCTCACACGCACTCACTTCCATACCAGCCTTAATCTTCCTATCACTGGCATTCGCCGCCACCACATTCTGGGCGGCCGGCCTCAGCGGAGGACTCTCAGGCTTCTCCTTCTACTTTGCGATCATCATGGCCTCCTTCTGGGCCGGCAATTCATTCGTATCCTTCCTCTCCGGTGTCGTCTCCCATGTTGTGCTCGGCTACGTCATCGTGGTTGCAATTCTGGCCTACTTCCTGCTCTTCTCCGGATTCTACATCAATCGGGATCGGATCCCCAACTATTGGATTTGGTTCCATTATATATCCCTTGTCAAGTACCCGTACGAGGGGGTGTTGCGGAACGAATTCGACGACCCTACGAAATGCTTCGTTAGGGGCGTCCAAATGTTCGACAACACCCCCCTCGGGGCGGTCCCGGCCGCCACCAAAGTAAAATTACTCCAAACATTGGGCACTACTTTGGGGATGACTATAACGCCATCAACTTGTGTAACCACTGGAGTTGATATTTTACAAAGACAAGGGGTAACTCAACTTAGTAAATGGAGCTGCTTGTGGGTTACTGTGGCTTGGGGGTTTTTCTTTAGGATCTTGTTTTACTTTTCTTTGTTACTAGGGAGCAAGAACAAGAGGAGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_19560.p1 GENE.S_Transcript_19560~~S_Transcript_19560.p1 ORF type:complete len:744 (+),score=42.70,ABC2_membrane|PF01061.20|2.8e-38,ABC2_membrane|PF01061.20|1.1e+03,ABC_tran|PF00005.23|2.8e-26,AAA_21|PF13304.2|0.21,AAA_21|PF13304.2|0.074,AAA_29|PF13555.2|2e-05 S_Transcript_19560:175-2406(+)
MDVPWMNQEMAKKVNSFRSTSIMPYFDPMDLEASNPNNTNSTDVSILPTLGKLLKNVGDVHKEATGDETPQHLALLPSPETFVLRFFNLTYNVKISRKLIFSDDQDGRGVGVFSRTKTLLNDVSGEVRDGEIMAVMGASGAGKSTLIDAMANRIAKGSLKGKITLNGEPLESRLLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRKLSKSRKKARVQQLIDQLGLRNAAKTIIGNEGHRGVSGGERRRVSIGIDIVHDPIILFLDEPTSGLDSTSAFMVVKVLQKIAQNGSIVIMSVHQPSYRILGLLDRLMILSQGQTVFNGPPSVLSDYFAEFGHPIPENENRTEFAMDLIRELEDTPEGPEALVDFQRQWQCKQGSSAPAIEGAPHHSGGRLSLKEAISASISRGKLVSGATNIDASPSSMVPTFANPFWVEIATLSQRAMMNSRRMPELFGIRLVALLVTGFILATIFWKLDNSPKGVQERMGFFAFAMSTTFYICADALPVFLQERYIFMRETAYNTYRRSSYVLSHALTSIPALIFLSLAFAATTFWAAGLSGGLSGFSFYFAIIMASFWAGNSFVSFLSGVVSHVVLGYVIVVAILAYFLLFSGFYINRDRIPNYWIWFHYISLVKYPYEGVLRNEFDDPTKCFVRGVQMFDNTPLGAVPAATKVKLLQTLGTTLGMTITPSTCVTTGVDILQRQGVTQLSKWSCLWVTVAWGFFFRILFYFSLLLGSKNKRR*

Click here to download the sequence:
Link to NCBI Protein BLAST