Transcript Information: S_Transcript_195706.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value2E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.24490491934215
Replicate 20.87980449155734
Replicate 31.4708930618822
Condition 2: 8 Hour
Replicate 10.52332246177013
Replicate 21.2009427950773
Replicate 30.88271148057438
Condition 3: 24 Hour
Replicate 10.63658402810014
Replicate 20.13904178881195
Replicate 30.30947293748609


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_195706.p1 GENE.S_Transcript_195706~~S_Transcript_195706.p1 ORF type:5prime_partial len:652 (+),score=93.21,RVT_1|PF00078.23|1.5e-45,zf-RVT|PF13966.2|8e+03,zf-RVT|PF13966.2|1.3e-16 S_Transcript_195706:2-1957(+)
TTTGAGATACCAAATAATAAAGCACCTGGTCCGGATGGTTATTCCTTTTTCTTTTTCAAGGTTGCTTGGGATATAGTGAGAAGTGATGTTTGTGAAGCCATAAAAGAGTTCTTCAAGAAAGGCAAAATGCTGAAGGCATTGAACTCTACTACCATTACAGTCATACCCAAGGTTAAAAATCCAAACTCCCCAGCTGATTTTAGACCTATTTCTTGTTGTAATGTCATCTATAGAGTCATTACCAAGCTGATTACTAGCAGAGTCAAAGAGGTTGCTGGTGATTTAATTGGAGCTGAGCAGGCTGCTTTTTTACCTGGAAGATCTATTGCATACAATATACTCCTTACTCACAATCTGGTCCATGCGTATGAAAGGAAACATATGTCCCCCAGGGCTATGATGAAGATTGATATCCGGAAAGCACATGACACAGTTGGATGGATTTTTTTACCCAAGGCCTTACTATATTATGGGTTTCCTGAGATGATGGTCGATAGGATTATGACTTGTGTAAGTACGGCACAGTTCTCTGTGAATTTGAATGGAGGATTGCAAGGTTTCTTTAATGGAGGATGTGGATTGAGGCAAGGGGATCCAATGTCCCCTTACCTGTTTGTTTTGTGCATGGAGATCATGTCTCGAATGATAAGGAAATGCTTCACTGATAATGTTTTTAAGGCTCATCCAAAGTGTGCAAAAATTAAACTCAATCATTTAATTTTTGCTGATGATATGCTTGTATTTTCAAGAGGAGATAAGGACTCAGTATCAACTCTTCACCGGACCTTCAATGCTTTTTCAGAGATGTCTGGATTGTTTGCTAACAGGAAGAAGAGCAGCATTTATTTTATTGGTGTTGATGAGACTACCAAGAATGACATATTGGCATGTACATGGTTTGGGGAGGGGAGACTACCATTCAGGTATCTTGGGGTCCCCCTTTCTTCCTCTAGACTCACTAAGAGTTTATGCGCCCCTTTGGTGGATAAGATCAAAATGAAGATTAAACACTGGGCCAATTGTCTGCTAAGCTATGCTGGAAGACTGCAATTGATTGCTACTGTAGTATTCTCTATTCTGATTTACTGGTGTTCTGTCTTTTTGCTACCAAAAGAAGTTATATATGAAATTGAGAAGGTGCGCAGGAGTTTATTATGGGGGAAAAAAGAGGGTGACACTAAGCTAATACCAATAGCTTGGCATACCATTTGTAGGCCTAAGAATGAAAGGGGTTTGGGGTTGTTTGATATGAGGATTTGGAACCTTGCTGCTATGAGTAAGCTGATTCATGCTCTTGAAAATGAACAGAGGGCGAGTTGGACAAAGTGGTGTCAGGCCTACTACATTAAACAAGGGACTATGTGGCTTGTGGAGAAGAAACCAGGGGCATCCTGGGTATGGAGATCTATTGTGACTGTCAAAGATGCTTTGATCTCTAAATATGGGGATATTAATGCAGCCAGGAAAGAGTTAAATTCATGCTATAAGGGGGGCAAATTCAGTATTCAAATGATGTATGATAAATGGAGATACAAGGGCGATAGGAGACATTGGGCTAAATTGATCTGGTTAAACTGTGCATTGCTCAGGAGTCATTTTATTGCTTGGATGGCCTTTCATAGAAAGCTGAAAACTAAGGATAGGTTGAAGAAGCTTGGAATAATCACAGATGACTTGTGTGTGCTATACAGGGCTCATGCAGAAACCTGTGAGCACTTGTTCTTTTCCTGTCCAGTTAGTGCTGATATTTGGGGCAGATTGCTTAGATGGGCAGGAGTATGCAGAGGAGCTTACAAGTTACAGAAGGAAATCAAATGGTTCATGAGAAGGGGAAAGAATAAATCAGTAATACAGCATGTAAGAAGGACTCTCCTAGTGCTAACAATTGCAGAAATCTGGCATGAGAGAAATCTTCAGTTGTTCCAGAATGCTGCACGACATCCGGATGTGATATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_195706.p1 GENE.S_Transcript_195706~~S_Transcript_195706.p1 ORF type:5prime_partial len:652 (+),score=93.21,RVT_1|PF00078.23|1.5e-45,zf-RVT|PF13966.2|8e+03,zf-RVT|PF13966.2|1.3e-16 S_Transcript_195706:2-1957(+)
FEIPNNKAPGPDGYSFFFFKVAWDIVRSDVCEAIKEFFKKGKMLKALNSTTITVIPKVKNPNSPADFRPISCCNVIYRVITKLITSRVKEVAGDLIGAEQAAFLPGRSIAYNILLTHNLVHAYERKHMSPRAMMKIDIRKAHDTVGWIFLPKALLYYGFPEMMVDRIMTCVSTAQFSVNLNGGLQGFFNGGCGLRQGDPMSPYLFVLCMEIMSRMIRKCFTDNVFKAHPKCAKIKLNHLIFADDMLVFSRGDKDSVSTLHRTFNAFSEMSGLFANRKKSSIYFIGVDETTKNDILACTWFGEGRLPFRYLGVPLSSSRLTKSLCAPLVDKIKMKIKHWANCLLSYAGRLQLIATVVFSILIYWCSVFLLPKEVIYEIEKVRRSLLWGKKEGDTKLIPIAWHTICRPKNERGLGLFDMRIWNLAAMSKLIHALENEQRASWTKWCQAYYIKQGTMWLVEKKPGASWVWRSIVTVKDALISKYGDINAARKELNSCYKGGKFSIQMMYDKWRYKGDRRHWAKLIWLNCALLRSHFIAWMAFHRKLKTKDRLKKLGIITDDLCVLYRAHAETCEHLFFSCPVSADIWGRLLRWAGVCRGAYKLQKEIKWFMRRGKNKSVIQHVRRTLLVLTIAEIWHERNLQLFQNAARHPDVI*

Click here to download the sequence:
Link to NCBI Protein BLAST