Transcript Information: S_Transcript_195754.p1


Annotated TAIR IDAT5G05850.1
Annotated Gene Nameplant intracellular ras group-related LRR 1
Annotated Gene Symbol(s)PIRL1
Annotation TypeOrtholog
Chromosome Positionchr5:1762691-1764609 | Reverse length=506
E-Value6.5E-138
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 142.210953620755
Replicate 239.859662100888
Replicate 337.331218054418
Condition 2: 8 Hour
Replicate 146.194274493608
Replicate 253.530223935539
Replicate 349.651113303446
Condition 3: 24 Hour
Replicate 145.273686025824
Replicate 245.190681693019
Replicate 340.919147569629


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_195754.p1 GENE.S_Transcript_195754~~S_Transcript_195754.p1 ORF type:5prime_partial len:331 (+),score=77.75,LRR_8|PF13855.2|1.9e-06,LRR_8|PF13855.2|1.1e-08,LRR_8|PF13855.2|1.2e-07,LRR_8|PF13855.2|1.2e-08,LRR_4|PF12799.3|0.0048,LRR_4|PF12799.3|0.00064,LRR_4|PF12799.3|0.15,LRR_4|PF12799.3|1.1,LRR_4|PF12799.3|0.0034,LRR_4|PF12799.3|2e-05,LRR_4|PF12799.3|3.1e-06,LRR_1|PF00560.29|28,LRR_1|PF00560.29|1.3,LRR_1|PF00560.29|0.28,LRR_1|PF00560.29|1.2e+03,LRR_1|PF00560.29|6.8e+02,LRR_1|PF00560.29|5.5,LRR_1|PF00560.29|51,LRR_1|PF00560.29|0.054,LRR_1|PF00560.29|88 S_Transcript_195754:2-994(+)
GCTGTTAGTGAGAATTGTGTTGATGAAGGTGAGAATGGTGACGTGGAAGTTGATGAGGAGGTTGTTAGGGTTTTGAAACAGGAGGAGGTTATCCAGAAAGTCGATTTGTCTGGCAGGAAGTTGAGGATTTTGCCTGAGGCTTTTGGGAAGGTTCGGTGTCTTGTTGCGGTTAATTTGTCCAGTAATCAGCTCCAGGCTATTCCTGACTCTATATGTGGATTGGAAAATCTTGAAGAGTTCAATTTGTCGTCAAATTCTCTGCAGTCACTCCCAGACTCGATAGGTCTGCTGCTAAAATTGAAGATCCTCAATGTCTCTGGAAACAAGCTAAGTGCCCTTCCGGACAGCATCTGCCATTGCAGGTCTCTGGTAGAGTTGGACGCAAGTTTCAATAACCTTGGGTACTTGCCCACTAACATAGGCTACGAGTTGGTGGACTTGAGAAAGCTTTCAGTTCAATATAACAAGATCCGCTCCCTTCCTACATCTATTGGAGAGATGAAATCTCTGCAGCATCTGGACGTGCATTTCAATGAGCTTCATGGTCTTCCCGTCACAATTGGCAAGTTGACAAGGCTCATGACTCTTAATCTGAGTGGCAATTTTAGTGATTTGAAGGAACTACCAGAGACATTTGGTGAATTAATAAATCTCGAAGAACTTGACCTGAGCAACAACCAGATCCATGCACTTCCATACTCATTTTGTAGGCTAGAGAAGTTGAGGAAATTCAACATAGAGCAAAACCCTATTGTTATTCCTCCCCTTGAGGTTGTGAACGATGGTGTGGAAACTGTGAGGATGTACATGGATAAGAAGTGGGCTGATTTCCTGGAGGAGGAAGAAAGGAGCAGGCAAGAGATGCAAGAAGAGCAACCCACTGGATGGTTAAAACGAAGTGTTTCAAAACTGGGTGAAGTCGTCTCAAATGTCTCTGAATATCTGGGATCTCCTCGCACTCCACGAGACCCTTGCCTTGATGAAGTGCGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_195754.p1 GENE.S_Transcript_195754~~S_Transcript_195754.p1 ORF type:5prime_partial len:331 (+),score=77.75,LRR_8|PF13855.2|1.9e-06,LRR_8|PF13855.2|1.1e-08,LRR_8|PF13855.2|1.2e-07,LRR_8|PF13855.2|1.2e-08,LRR_4|PF12799.3|0.0048,LRR_4|PF12799.3|0.00064,LRR_4|PF12799.3|0.15,LRR_4|PF12799.3|1.1,LRR_4|PF12799.3|0.0034,LRR_4|PF12799.3|2e-05,LRR_4|PF12799.3|3.1e-06,LRR_1|PF00560.29|28,LRR_1|PF00560.29|1.3,LRR_1|PF00560.29|0.28,LRR_1|PF00560.29|1.2e+03,LRR_1|PF00560.29|6.8e+02,LRR_1|PF00560.29|5.5,LRR_1|PF00560.29|51,LRR_1|PF00560.29|0.054,LRR_1|PF00560.29|88 S_Transcript_195754:2-994(+)
AVSENCVDEGENGDVEVDEEVVRVLKQEEVIQKVDLSGRKLRILPEAFGKVRCLVAVNLSSNQLQAIPDSICGLENLEEFNLSSNSLQSLPDSIGLLLKLKILNVSGNKLSALPDSICHCRSLVELDASFNNLGYLPTNIGYELVDLRKLSVQYNKIRSLPTSIGEMKSLQHLDVHFNELHGLPVTIGKLTRLMTLNLSGNFSDLKELPETFGELINLEELDLSNNQIHALPYSFCRLEKLRKFNIEQNPIVIPPLEVVNDGVETVRMYMDKKWADFLEEEERSRQEMQEEQPTGWLKRSVSKLGEVVSNVSEYLGSPRTPRDPCLDEVR*

Click here to download the sequence:
Link to NCBI Protein BLAST