Transcript Information: S_Transcript_195768.p1


Annotated TAIR IDAT2G37320.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:15667223-15668725 | Forward length=500
E-Value2.4E-162
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5249594053431
Replicate 21.8759488348349
Replicate 31.6704141739306
Condition 2: 8 Hour
Replicate 14.0995205045875
Replicate 23.597691001213
Replicate 33.9006819092295
Condition 3: 24 Hour
Replicate 12.0593143401484
Replicate 20.96352618531606
Replicate 31.5851192417263


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_195768.p1 GENE.S_Transcript_195768~~S_Transcript_195768.p1 ORF type:complete len:541 (+),score=87.79,PPR_2|PF13041.2|0.0076,PPR_2|PF13041.2|3.2e-12,PPR_2|PF13041.2|4.9e-06,PPR_2|PF13041.2|1.1e-09,PPR_2|PF13041.2|0.039,PPR_2|PF13041.2|4,PPR_2|PF13041.2|2e+03,PPR|PF01535.16|0.00011,PPR|PF01535.16|2e-05,PPR|PF01535.16|4.8e+02,PPR|PF01535.16|9.9e-07,PPR|PF01535.16|3.9e-07,PPR|PF01535.16|1.3,PPR|PF01535.16|0.97,PPR|PF01535.16|6.3e+03,PPR|PF01535.16|3.1e+02,PPR_1|PF12854.3|0.034,PPR_1|PF12854.3|0.1,PPR_1|PF12854.3|35,PPR_1|PF12854.3|5.7e-07,PPR_1|PF12854.3|0.00026,PPR_1|PF12854.3|2.6e+03,PPR_1|PF12854.3|0.0041,PPR_1|PF12854.3|1.5e+03,PPR_3|PF13812.2|0.054,PPR_3|PF13812.2|0.0053,PPR_3|PF13812.2|1.3e+03,PPR_3|PF13812.2|0.0021,PPR_3|PF13812.2|0.0046,PPR_3|PF13812.2|11,PPR_3|PF13812.2|50,PPR_3|PF13812.2|3e+02 S_Transcript_195768:287-1909(+)
ATGAGCTTCAGGAATCTTCCTGGATGCTACCTGAGTAAAGGGAAAACCCTGAAATTCATAACATGTTTGCCCATTTTACAAGCGTTGCTTCATCTCAAGGCCTTTTCTACGCATAGACTTGAACGAAGCAATGAACTCAAAAGTTTAAATAAGGCACTAAGAGTTATTGACCTCGTATCACCAAAGCCTGCTCGCACTAACAACCTTGAAAGCCATCTCCAACTTATTCAAGACTTCCTACAAGCTCGCTCTAAGCATGCTATTGAAGACAACTCTGGCAATGGTTTGACTTTCTCAGGTTCCAAAAGCCAAAATCAAATTGATCGAAAGCAGTTATATTTCCCTGTCAAGATTGTGAATCCAATTTTAGGTGTTTCTGAACTGCTTAGAAATGGGTTGCCAATTGATGTTGTAGTGCTTTCAGGTGCATTGAGTTCTTGCAGGTGTAGAGGGAAACTTTACAATGAAACTCAGCTTCAATGTTTAGCTATTAAAGGTGGATATTTTGTGAATGTTTATATTGGAACTTCTTTGATTAGCATCTACTCAAAATATGGGGATCTACGTTCTGCTTTAAAGGTATTTGAGGAAATGCCTCTCAGAAATGTCGTATCATGGACTGCTCTTATTTCTGGTTTTTCTCAGGAATGCCAAGTTGATGTCTGTTTGGAGCTTTACAATCAGATGACCGATTCAGGTCTTAAACCCAATGGATTTACACTAACAAGTCTCTTGAGTGCCTGTGTGGGTAGTGGCTTTCTGATACAAGGGAGAAGTGCTCATTGTCAAGCTATTTTATGGGGTTTTGATTCATATATTAATGTTGCAAACACACTAATCTCAATGTATTGCAAGTGTGGGAACGTTGAAGATGCATTCTCTATATTTGAAACAATGCATGCCAAAGACCTCGTTTCATGGAACTCGATGATTGCAGGGTATGCATTGCATGGACTAGCAGTGCAGGCAATTGATCTCTTTGAGAAGATGAGAAAACTAAAGATCAAGCCAGACGGTATTACTTTCCTAGCTGTTCTCTCATCATGCCGTCATGCTGGTCTTGTTAATCAAGGACGGTTCTATTTCAATTCGATGCTAGAAAGTGGGGTGGCACCCAATGTGGGTCATTATTCATGCATCGTGGATCTTCTTGGCCGAGCTGGATTGGTGGAAGAGGCTCGGATTTTTATTCTGGATATGCCGATACAACCCAATGCAATTATATGGGGCTCACTTCTTTCTTCTTGTAGGCTTCATGATAATGTTTGGATTGGAATAGAGGCTGCTGAAAACAGGCTTGCACTGGAACCATCTTGTGCTGCCACCCATGTGCAGCTCACAAAATTGTATGCAAGAGTGGGATTTTGGGACCAGGTAGCAAGAGTAAGGAAGTTGATGAAGGACACTGAGGTGAAAACAAACCCTGGGTATAGCTGGATTGAGATAGGAAATGAAATCTACAGGTTTAGCGTGAATGACACTTCAAACTCCAGAACAAATGAGATTCTCTTTATTTTGGAGGGTCTGATGGGTCAATTGGCAGTATCTGATGATGTGCCAGAATTATTTGAAGAGATTGGTGATGATTCACGAACCAGTTTTATTATGACAAAACAAATGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_195768.p1 GENE.S_Transcript_195768~~S_Transcript_195768.p1 ORF type:complete len:541 (+),score=87.79,PPR_2|PF13041.2|0.0076,PPR_2|PF13041.2|3.2e-12,PPR_2|PF13041.2|4.9e-06,PPR_2|PF13041.2|1.1e-09,PPR_2|PF13041.2|0.039,PPR_2|PF13041.2|4,PPR_2|PF13041.2|2e+03,PPR|PF01535.16|0.00011,PPR|PF01535.16|2e-05,PPR|PF01535.16|4.8e+02,PPR|PF01535.16|9.9e-07,PPR|PF01535.16|3.9e-07,PPR|PF01535.16|1.3,PPR|PF01535.16|0.97,PPR|PF01535.16|6.3e+03,PPR|PF01535.16|3.1e+02,PPR_1|PF12854.3|0.034,PPR_1|PF12854.3|0.1,PPR_1|PF12854.3|35,PPR_1|PF12854.3|5.7e-07,PPR_1|PF12854.3|0.00026,PPR_1|PF12854.3|2.6e+03,PPR_1|PF12854.3|0.0041,PPR_1|PF12854.3|1.5e+03,PPR_3|PF13812.2|0.054,PPR_3|PF13812.2|0.0053,PPR_3|PF13812.2|1.3e+03,PPR_3|PF13812.2|0.0021,PPR_3|PF13812.2|0.0046,PPR_3|PF13812.2|11,PPR_3|PF13812.2|50,PPR_3|PF13812.2|3e+02 S_Transcript_195768:287-1909(+)
MSFRNLPGCYLSKGKTLKFITCLPILQALLHLKAFSTHRLERSNELKSLNKALRVIDLVSPKPARTNNLESHLQLIQDFLQARSKHAIEDNSGNGLTFSGSKSQNQIDRKQLYFPVKIVNPILGVSELLRNGLPIDVVVLSGALSSCRCRGKLYNETQLQCLAIKGGYFVNVYIGTSLISIYSKYGDLRSALKVFEEMPLRNVVSWTALISGFSQECQVDVCLELYNQMTDSGLKPNGFTLTSLLSACVGSGFLIQGRSAHCQAILWGFDSYINVANTLISMYCKCGNVEDAFSIFETMHAKDLVSWNSMIAGYALHGLAVQAIDLFEKMRKLKIKPDGITFLAVLSSCRHAGLVNQGRFYFNSMLESGVAPNVGHYSCIVDLLGRAGLVEEARIFILDMPIQPNAIIWGSLLSSCRLHDNVWIGIEAAENRLALEPSCAATHVQLTKLYARVGFWDQVARVRKLMKDTEVKTNPGYSWIEIGNEIYRFSVNDTSNSRTNEILFILEGLMGQLAVSDDVPELFEEIGDDSRTSFIMTKQM*

Click here to download the sequence:
Link to NCBI Protein BLAST