Transcript Information: S_Transcript_195804.p1


Annotated TAIR IDAT2G12880.1
Annotated Gene NameZinc knuckle (CCHC-type) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:5291523-5291882 | Forward length=119
E-Value0.0004
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.76711533493868
Replicate 20.63595624001706
Replicate 30.77696670862175
Condition 2: 8 Hour
Replicate 11.5131097342533
Replicate 21.7857794923063
Replicate 31.9378043277256
Condition 3: 24 Hour
Replicate 10.19374619503853
Replicate 20.85429001507296
Replicate 31.1184942086526


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_195804.p1 GENE.S_Transcript_195804~~S_Transcript_195804.p1 ORF type:3prime_partial len:451 (+),score=89.17,Retrotrans_gag|PF03732.13|8.2e-15,RVP_2|PF08284.7|1.9e-07 S_Transcript_195804:616-1965(+)
ATGACAACGATTGTCACTATAGCTAACCGATATGAGGCGCAAATACGTAGGATTAAATTGTCACAAGACATGGCTATGACACCAGAGCAGATTTCTGCAAGGTTGAGGGCTACTGAAGATCTGAATGCGAACATGGTCGCTATGCTACAAAGGCTTGTTGAGAGAGGAACTGTTGAAGATCCATCCGCCTCAATGCTGAAGAAGATTGCTAGCCACCATCCACCTACATATGATGGCAAGGAAGATCCAGCTGTCCTTGAACATTGGATACGAGAGATGGACAAATTGTTCCTGGCAATCGGATGTCCAGAAAACTTACGAGTCAACAATGCCACCTACTACCTGCAAGAAGAAGCTGACCGTTGGTGGATTTCAGAAGGCCCTGGTCTGCTTGAAAGCCCTGGCTTTGGCTGGGACGCTTTGAAAACTGCCTTGCGAAATCGTTTTTATCCTGAGCATCTAAAAAGGCAGAAGTACAATGAATTCGTTAACCTGAGGCAAGGTAGAATGACGATCACCGAATATGCCAACAAGTTCACTGATCTTGCCAGATTTGCTCCGAACTTGGTGCCTGATGAGAGATCAAAAGCACACAAGTTTGAGGATGGCCTCAATTTCCACATCCAAGAACTCCTTGGAGGTATTTGCTCCAATACCTTCCAAGAGGCATATGGACGAGCTGCTAACTTGGCTCGCATCCTCCAGAGGAAAGAAGAAATCATTGGGAGAAACAGGAAAAGAGACAGTGGCTCTGGCTCCAGCTCACATTCAAGTCCACACTTTGGTGATAAGAGGCCACGTTTTGGCAATGGGAACCTAGGAAGTCATGGTCAGAACTACCAAAGTCCTGGAGGTGACAGAAGGAACTTTCAAGGTAATAGCCATTATCAACAGCAACGTCTTCCAACCTCTCAGAGGAACCAACCCCCACAGAGGAACTGCTATAAGTGTGGGAAGCGACTCCATCCTGGTGCGTCATGTGATGGCGTTCCCTTCACCTGCTTTGATTGTGGAGGTAAGGGGCACAGGTCCTTTGAATGTCCTCAGAAGAAAAGGGGAACTCTGCAGCAGCAACAACAAGGTTTCCAGCATAGCCAGACCTTTAGGCCTAATAATGAAGGCTTTAGGCCCAACCAGAGTTTCAATGGAGCTGTAGGTGGGACTAACAATGGCAATGGGTCCCGCCCAAATAACCCGCCCCAAAATGGCAACAGAAATGGAGGAAACAATGGACGTATCTTTGTGATGAACCAAGTACAGGCTGAGGCAGATCCCAATGTAGTCACGGGTACTTTTCTTCTATCTTCTCACCCTGCTTATATTCTTTTTGACTCTGGTGCTTCACATTCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_195804.p1 GENE.S_Transcript_195804~~S_Transcript_195804.p1 ORF type:3prime_partial len:451 (+),score=89.17,Retrotrans_gag|PF03732.13|8.2e-15,RVP_2|PF08284.7|1.9e-07 S_Transcript_195804:616-1965(+)
MTTIVTIANRYEAQIRRIKLSQDMAMTPEQISARLRATEDLNANMVAMLQRLVERGTVEDPSASMLKKIASHHPPTYDGKEDPAVLEHWIREMDKLFLAIGCPENLRVNNATYYLQEEADRWWISEGPGLLESPGFGWDALKTALRNRFYPEHLKRQKYNEFVNLRQGRMTITEYANKFTDLARFAPNLVPDERSKAHKFEDGLNFHIQELLGGICSNTFQEAYGRAANLARILQRKEEIIGRNRKRDSGSGSSSHSSPHFGDKRPRFGNGNLGSHGQNYQSPGGDRRNFQGNSHYQQQRLPTSQRNQPPQRNCYKCGKRLHPGASCDGVPFTCFDCGGKGHRSFECPQKKRGTLQQQQQGFQHSQTFRPNNEGFRPNQSFNGAVGGTNNGNGSRPNNPPQNGNRNGGNNGRIFVMNQVQAEADPNVVTGTFLLSSHPAYILFDSGASHS

Click here to download the sequence:
Link to NCBI Protein BLAST