Transcript Information: S_Transcript_19582.p1


Annotated TAIR IDAT5G35910.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H fold protein with HRDC domain
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:14029871-14035405 | Reverse length=870
E-Value1.7E-297
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.674606659704
Replicate 215.378512212759
Replicate 315.785731732573
Condition 2: 8 Hour
Replicate 126.024205132773
Replicate 223.272410343444
Replicate 322.060999057274
Condition 3: 24 Hour
Replicate 115.296046596698
Replicate 213.348600886069
Replicate 313.51944329342


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_19582.p1 GENE.S_Transcript_19582~~S_Transcript_19582.p1 ORF type:complete len:944 (+),score=226.41,DNA_pol_A_exo1|PF01612.16|4.3e-45,HRDC|PF00570.19|2.6e-13,PMC2NT|PF08066.8|1.9e-11 S_Transcript_19582:286-3117(+)
ATGGAGATCGATCCTTCGCAGTCGGAGGCTCTTCGGCAAAAATCAGACACTCTAAGAGCTCTATCGACGGGCCCATTTCCTTCGTCAATTTCGAAACTCTCTAGTTCATCTAGGGTTTTACCTTCCGAGAAGGACTTCCATTTCTACTACAACTTCGACGAGTTCCGAGCTCCAATCGACGAAATTGGGGCCAAGTCCCATTCTATGTTACAGAAAATTGGCTCTTCGAGGCATTTGTTTTCCGGAAATGAGATGAGTTTTCCTCAGGGTGATGTTGATGATGATGACGCCTGTGATTGGCTTGTGAATGTAAATGATGACGTCATTGAGCGGTTTGATTACTCGATTGATGAGTTTTCGAGGTTAAGGCAGGAAGAAGAAGAAGGAGCTAGGGTTAGGGCTGGGGGTGTGGTTGATCAGAACGGGTTTCAGTTGGTTTTGGGAAAGAAGAAGAGGTTTGTTATTCCGCCTGGTGCGGTCATAGGGTTGAGAGAGAAAGAGGATTCAACAACGCCTGTGGTGGTGAAGGTGGCGGAGAGGGATAAGAAGACGATGGGGCCAAAGCCTAAGATTCCGTTCCATATTCCGACGATTAAGAGGCCACAGGAGGAATTTAATATCCTGGTTAATAATGCTAATCAGCCTTTCCAGCATGTTTGGCTCGAGAGGAGTGAGGATGGGTCCAGGTTCATTCATCCATTGGAGAAATTGTCGGCTGTGGATTTTGCTGATCAAACGAGTCTTGAACCAGTGGAGCCACTGCCATATGAATCTACTCCATTCAAGGTGGTGGAAGAAGTCAAAGATCTGAAGGATTTAGCCGCTAAACTGCGCAGTGTGAATGAATTTGCAGTCGACTTGGAGCACAATCAGTATCGATCCTTCCAAGGGTTGACTTGCTTGATGCAAATTTCTACCAGAACTGAAGACTTTGTTGTTGATACTTTGAAACTTAGAATTCATATTGGCCCTTATCTGAGGGAAGTTTTCAAGGATCATACTAAAAAAAAGGTCATGCATGGAGCTGACAGGGATATTGCTTGGCTTCAGAGGGACTTTGGCATATATGTGTGCAATTTATTTGATACGGGACAGGCATCAAGAGTGTTGCAAATGGAGCGACATAGCCTGGAATATCTTCTCCAACATTTTTGTGGAGTTACAGCAAACAAAGAATATCAGAATGCAGATTGGAGGTTGCGTCCCCTCCCTGACGAGATGATAAGATATGCCCGAGAAGACACCCACTATCTGTTATATATATATGATTTAATGAGGATCAGGCTTTCAGAGACTATGAATCCTGAATACCCTGATGGGCTTTTGCTGGAGGTTTACAAGCGGAGTTATGATTTATGTATGCAACTTTATGAAAAGGAGTTGTTAACAGATACTTCATATCTTTACATATACGGGGTGCAGGGGGCTAATCTAAATGCTCAGCAGCTTTCCATTGTTGCCGGTCTAAGTGAATGGAGAGATATGATTGCCCGTGCAGAGGATGAAAGCACCGGTTATATACTGCCAAATAAGACACTCTTGGAAATAGCCAAGCAGATGCCCCTCACTACTAGTAAGTTGCGACGATTGGTGAAGTCTAAGCACCCTTATGTGGAGCGCAATCTCAGTGCTGTGGTCACCATCATCAGGCATGCCGTTCAGAATGCTTCATCATTTGAAGCAGTGGCTGAGCAATTGAAAGATGGTCGCATTCAGGCACCTGAATCAAGTTCTGCAGGCATTGACTTTCCGGAGGTTTATACTGCTGGCGAGCAGAGTGGAGAAGGTTTTGATGGTGACCAGAATGAACATGTATCAGATCCTTTGCCGTCAAATGAAGGAACTTGCAAGCTTAGCAAATATAGAGATGGAGTTTCTTTTGGGGAATTCAGTCGGAATGCGAATATGGGGAAGGATACCAAAGACAGCCTTGCATCCTCTAGTCAGAAGGGTGACATAAATGTTGAAGCAACTGTCCAGGTGCTGAGGAAGCCAAATCGTGCTTTTGGGGCATTGCTGGGTAGTTCCTCATCAAGAAAGAAACCTGATTTCATAAAGGACAAGGGAGACAACAAATTGGAGCAGATCAAGTCGTCAGTGAATCTGCCATTTTTCTCCTTTTTGCAAAGGAATCAGCAGTCAAATTTGCCATCTAAGCAAACGCCTCAAGAGCCAAACAGAGTTCTGGAGACACAGCTTTCTGCAGAGTGTTCTGCTGAACCAGCTACGAGCTTAGATTCAGAGGATATAATATTATTAGATGGTGATAGACAGTCGAATCAAGCGGCTGAAGAGCTAGTGCCTGAAAATCAACCATCTTCAAGCGGTAAGCTGGACGATATTATACTGCTGGACAGTGATTCTGATGATGAAGCGCCACGAGCTGATGAGTCAGCTGGTACTGAAAATCAGGCAAACACAAAAGATAATCAAGAAACTTCCACACCCGAGCTGGTAGTTCTGGATGAGGATGATGACGTTGAAGAAGATGAGAATGATAATGGTGAGCCAATGTCCCTTTCCGATTTGTCTTCTAATTTCCAGAAATGCCTGCAGTCTTCAAATGAGAAAGAAGCAGCCAAACAAGATGGCAAGTCTAAAGAAACTGGTTTCCTACAGTTTAAACCTTTCGATTATGAGGCTGCAAGGAAAGAGTTGAGATTTGGGGAAGATGCAGGGAGAGGCGCAAGGACAGGTGATAATAGTGGTGGTGGAAAGAATATGGGAAAGAAGAAAGGCGATAAGAGCAAGCAAGAGGAAGCTGGACTTCCCCAAGGTAGAAGACGTCAAGCTTTCCCGGCTAGTGGGAATCGTAGTGCTACTTTTAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_19582.p1 GENE.S_Transcript_19582~~S_Transcript_19582.p1 ORF type:complete len:944 (+),score=226.41,DNA_pol_A_exo1|PF01612.16|4.3e-45,HRDC|PF00570.19|2.6e-13,PMC2NT|PF08066.8|1.9e-11 S_Transcript_19582:286-3117(+)
MEIDPSQSEALRQKSDTLRALSTGPFPSSISKLSSSSRVLPSEKDFHFYYNFDEFRAPIDEIGAKSHSMLQKIGSSRHLFSGNEMSFPQGDVDDDDACDWLVNVNDDVIERFDYSIDEFSRLRQEEEEGARVRAGGVVDQNGFQLVLGKKKRFVIPPGAVIGLREKEDSTTPVVVKVAERDKKTMGPKPKIPFHIPTIKRPQEEFNILVNNANQPFQHVWLERSEDGSRFIHPLEKLSAVDFADQTSLEPVEPLPYESTPFKVVEEVKDLKDLAAKLRSVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDFVVDTLKLRIHIGPYLREVFKDHTKKKVMHGADRDIAWLQRDFGIYVCNLFDTGQASRVLQMERHSLEYLLQHFCGVTANKEYQNADWRLRPLPDEMIRYAREDTHYLLYIYDLMRIRLSETMNPEYPDGLLLEVYKRSYDLCMQLYEKELLTDTSYLYIYGVQGANLNAQQLSIVAGLSEWRDMIARAEDESTGYILPNKTLLEIAKQMPLTTSKLRRLVKSKHPYVERNLSAVVTIIRHAVQNASSFEAVAEQLKDGRIQAPESSSAGIDFPEVYTAGEQSGEGFDGDQNEHVSDPLPSNEGTCKLSKYRDGVSFGEFSRNANMGKDTKDSLASSSQKGDINVEATVQVLRKPNRAFGALLGSSSSRKKPDFIKDKGDNKLEQIKSSVNLPFFSFLQRNQQSNLPSKQTPQEPNRVLETQLSAECSAEPATSLDSEDIILLDGDRQSNQAAEELVPENQPSSSGKLDDIILLDSDSDDEAPRADESAGTENQANTKDNQETSTPELVVLDEDDDVEEDENDNGEPMSLSDLSSNFQKCLQSSNEKEAAKQDGKSKETGFLQFKPFDYEAARKELRFGEDAGRGARTGDNSGGGKNMGKKKGDKSKQEEAGLPQGRRRQAFPASGNRSATFR*

Click here to download the sequence:
Link to NCBI Protein BLAST