Transcript Information: S_Transcript_19601.p1


Annotated TAIR IDAT3G01180.1
Annotated Gene Namestarch synthase 2
Annotated Gene Symbol(s)AtSS2, SS2
Annotation TypeOrtholog
Chromosome Positionchr3:62456-65678 | Reverse length=792
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.003078938238
Replicate 232.467710064886
Replicate 331.46649539202
Condition 2: 8 Hour
Replicate 134.199607434513
Replicate 230.326283711629
Replicate 335.18430647884
Condition 3: 24 Hour
Replicate 135.841790319753
Replicate 236.48593863649
Replicate 335.622245431423


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_19601.p1 GENE.S_Transcript_19601~~S_Transcript_19601.p1 ORF type:complete len:810 (+),score=172.30,Glyco_transf_5|PF08323.7|1.1e-63,Glycos_transf_1|PF00534.16|6.4e-16,Glyco_trans_1_4|PF13692.2|3.7e-08 S_Transcript_19601:551-2980(+)
ATGGCATCTCTAAATTCGTTCCCTTTTACCATTGAAGCAAGAATTGAGAACAGGGTTCTGCTTCATTCCTCATATGGGTCTCATCTTCTGGCATATCAAAAGAAAAAGCCTTTGGATTGGGGTGGTTTGGTTGATTCAAGGACAAGTCTTGTGAAGTTTATGGAGCAAAATTGTAGTAGTAACAGTAATGGAAAATCAACATCTTTTGGTAGATGTTTAAGGAGGAGTAAGCTTGTGAGAGCAACAGCAAAGGATTCTGTTGAAGGTGAAGATGAACAAGAGAGTGAAGATGCAATCCAGGCTACTATTGAGAAGAGCAAGAAGGTTCTAGCTATGCAGCAAGAGCTACTTCAACAGATTGCCGAAAGGAGGAAGCTAGTGTCCTCTATCAAGAGTAGTATAGTCAACCCCGATACTAAAATCTCTGCTAAGGATAGTGACAACTTTTCTGCTGAGGTTGATATTAATCATAAAAGTGTGGCTGATCAGTTCCCCAGCATTGTTGCTTCTAGAAGAAAAGTTGATTCAGTTCCCAACACTAAAGATCAAACCCCTGTTTTTCCTGTCAGTTCAACTGAAAGGGAAAGAGAACAAGTAAAAGCAGTAAAACTTCCATCCAAAACTCGAAATCTGGATTTGTCTACCCGGAAAGATGTGACAACTAGGGTACCAGAAAAAACCCCCCGTCAGTTAGATGGACTTTCAGTTGAAGGCAAAAGAGAAACCACCAAGAGTTTATCACTTGAAAAGCCTGCTTCCATTGTGGATTCACAGAGGAAAACTGAAGAGATTGCGAATGTACCTGAATTTTTATCAAATACTTATAGGTCTAGTCCTCAGGATAAAAAGGATCAAGAGTCGGAAAAGTCGACTGCCAAGGAGACGAGTGATCAGGTGAATGATCCTGTTGGGGAAGAGGAGAAGCCACCTCCTCTTGCCGGAGCCAATGTAATGAATGTCATCTTGGTAGCTGCAGAATGTGCTCCATGGTCTAAAACAGGTGGGCTTGGAGATGTTGCTGGGGCCTTGCCAAAGGCTTTGGCTCGGCGTGGGCATAGAGTAATGGTTGTGGTACCTCGATATGGAGAATATGCTGAGACTCAAGAGACGGGAGTCAGGAGGAGATACAAAGTTGATGGCCAGGATATGGAAGTATGTTACCTTCAGACGTATATAGATGGTGTGGACTTTGTATTTGTTGACAGCCCTATATTTCGCCATATTGGGAATAACATATATGCGGGAAGCAGACTGGATGTTCTGAAACGAATGATTCTCTTCTGCAAGGCTGCAGTTGAGGTTCCTTGGTATGTACCATGTGGAGGTGTGTGCTATGGAGATGGAAATTTGGTGTTTATTGCTAATGACTGGCATACTGCACTGCTACCGGTGTATTTGAAAGCATACTATCGAGACAATGGTTTGATGAAGTATACACGATCGGTCCTTGTCATCCACAACATAGCACACCAGGGCCGTGGTCCAGTGGATGATTTCTCTTATGTGGATCTTCCACCGCACTACATTGACTACTTTAAATTGTACGACCCAGTTGGTGGAGAGCATTTTAATATATTTTCAGCAGGTCTCAAAGCCGCTGATCGTATAGTTACTGTTAGTCATGGGTATGCATGGGAGCTGAAAACTCAGGAGGGTGGTTGGGGACTGCATGAGATCATTAACGCAAACGATTGGAAACTGAGAGGGATAGTGAATGGAATCGACTCAAAAGAGTGGAACCCCGAGTTTGATGTTCATCTAAAATCTGATGGCTACACAAACTACTCTCTCGAGTCACTTAAACCAGGAAAATCACAGTGCAAGGCAGCTTTACAAAAGGAGCTTGGTTTACCTCTTCGAGAAGATGTTCCACTGATTGGTTTCATTGGTAGGCTTGATCACCAGAAAGGCGTTGATATCATAGCTGAAGCAATACCTTGGATAATGGGTCAAGATGTGCAGTTAGTCATGTTAGGAACTGGGAGACCTGACCTAGAACAGATGCTCAGGCAGTTTGAAAGCCAACACCCGGATAAAATACGAGGATGGGTAGGGTTTTCAGTGAAGATGGCCCACCGTATAACAGCTGGAGCAGATATTTTGCTCATGCCATCAAGATTTGAGCCATGTGGCCTTAATCAGCTTTACGCAATGAGCTATGGTACGATTCCAGTAGTCCATGCTGTTGGTGGGCTGAGAGATACGGTGCAACCTTTTGATCCGTTCAATGACACTGGCCTTGGCTGGACATTTGACCGGGCTGAGGCAAACCGTCTGATAAATGCTTTAGGAAACTGCTTGTTGACATATCATCAGTACAAACAGAGCTGGGAAGGTCTCCAAACACGAGGAATGACACAAGACTTGAGTTGGGATAATGCCGCCCACAACTATGAGGAAGTCCTTGTTGCTGCCAAGTACCAGTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_19601.p1 GENE.S_Transcript_19601~~S_Transcript_19601.p1 ORF type:complete len:810 (+),score=172.30,Glyco_transf_5|PF08323.7|1.1e-63,Glycos_transf_1|PF00534.16|6.4e-16,Glyco_trans_1_4|PF13692.2|3.7e-08 S_Transcript_19601:551-2980(+)
MASLNSFPFTIEARIENRVLLHSSYGSHLLAYQKKKPLDWGGLVDSRTSLVKFMEQNCSSNSNGKSTSFGRCLRRSKLVRATAKDSVEGEDEQESEDAIQATIEKSKKVLAMQQELLQQIAERRKLVSSIKSSIVNPDTKISAKDSDNFSAEVDINHKSVADQFPSIVASRRKVDSVPNTKDQTPVFPVSSTEREREQVKAVKLPSKTRNLDLSTRKDVTTRVPEKTPRQLDGLSVEGKRETTKSLSLEKPASIVDSQRKTEEIANVPEFLSNTYRSSPQDKKDQESEKSTAKETSDQVNDPVGEEEKPPPLAGANVMNVILVAAECAPWSKTGGLGDVAGALPKALARRGHRVMVVVPRYGEYAETQETGVRRRYKVDGQDMEVCYLQTYIDGVDFVFVDSPIFRHIGNNIYAGSRLDVLKRMILFCKAAVEVPWYVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMKYTRSVLVIHNIAHQGRGPVDDFSYVDLPPHYIDYFKLYDPVGGEHFNIFSAGLKAADRIVTVSHGYAWELKTQEGGWGLHEIINANDWKLRGIVNGIDSKEWNPEFDVHLKSDGYTNYSLESLKPGKSQCKAALQKELGLPLREDVPLIGFIGRLDHQKGVDIIAEAIPWIMGQDVQLVMLGTGRPDLEQMLRQFESQHPDKIRGWVGFSVKMAHRITAGADILLMPSRFEPCGLNQLYAMSYGTIPVVHAVGGLRDTVQPFDPFNDTGLGWTFDRAEANRLINALGNCLLTYHQYKQSWEGLQTRGMTQDLSWDNAAHNYEEVLVAAKYQW*

Click here to download the sequence:
Link to NCBI Protein BLAST