Transcript Information: S_Transcript_19602.p1


Annotated TAIR IDAT1G30760.1
Annotated Gene NameFAD-binding Berberine family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:10918321-10920441 | Forward length=534
E-Value7.7E-237
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.424257260224
Replicate 29.5670503390993
Replicate 310.445443445579
Condition 2: 8 Hour
Replicate 112.983954458573
Replicate 212.591589145899
Replicate 312.600872743476
Condition 3: 24 Hour
Replicate 18.892607438649
Replicate 210.108461092459
Replicate 311.160196639432


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_19602.p1 GENE.S_Transcript_19602~~S_Transcript_19602.p1 ORF type:complete len:565 (+),score=90.93,FAD_binding_4|PF01565.19|2e-26,BBE|PF08031.8|1.3e-22 S_Transcript_19602:1803-3497(+)
ATGCCAAAGGGTATTCATTTCCCCTCAGAGACATTCTTCACAATGAAGAACAACTTGATAATGTGTTCAAGCACCTCAAAATTTCTATCAGGTTTGATGATTCTTGCAATATTTGCCTCTTGGGCATCTGCTGATTCCATCCAAGATAATTTCCTCCAATGCCTATATAAAAATGTTAGGCCCCAGGCCACACTTCCCCTATCATATTACATGCCAAACAACTCTTCCTTTTCAATTGTCCTGCAATCTACCGCTCAAAACCTTAGGTATCTGATGCCTTCTGTGCGGAAACCTGAACTAATTGTAATGCCAACGGACGAATCCCACATCCAAGGTGCCGTTATATGTGCAAAAAAAGTTGGTGTTCAGCTTAGAGTTCGTAGTGGGGGCCATGACTATGAAGGGGTTTCCTATGCATCTGAGATGGAGGAACCATTTATCATCCTCGACATGGCCAAGCTGCGAACGGTGACCGTTCATATTGAAGATAATAGTGCATGGGTGGAGGCAGGGGCCACTATCGGTGAACTCTACTATCACATCTCTCGGGAGAGCAAGGTCCATGGCTTCCCTGCTGGCCTCTGCACTAGCTTGGGTGTGGGAGGACACATCACAGGAGGAGCCTATGGCCCTATGATGAGAAAATATGGCCTTGGAGCTGACAATGCTATTGATGTCAAGATGGTCGATGCCAACGGTCAAGTACTAGACCGAAAATCAATGGGAGAGGATTTATTCTGGGCCATTAGAGGAGGTGGAGGGGGTAACTTTGGGATCATCCTTGCATGGAAGATTCAGTTAGTCCCCGTGCCAGAAAAAGTGACAGTTTTTACCGTTGCTAAAACCTTGGAACAAGGCTTAACAAAGATCCTGTATAAATGGCAGAATGTTGCTGACAAGATTGATGAAAATCTGTTCATCAGAGTAATGTTCCAGAACTCCAAGAACCAAAAGGGTGAGAAAACCGTGATTGGTTTGTTCCAGGCCTTGTACCTCGGACAAGCTGATCAGCTCCTCAAGGTTATGCAACGTGATTTCCCTGAATTGGGGTTGGGGAAAAAAGATGTTTCTGAAGTGAGTTGGATAGAATCAGTCCTTTACATTGCTGGATACCCATCTGGCACGAAACCTGAAGTTCTGCTTGAAGCAAAGCCAATGTTTACAAACTACTTCAAGGCAAAGTCAGACTTTGTTAGGGACCCTATCCCAGAAAGTGGTCTTGAAGGGCTATGGAAAAGGTATATGGAAGATGAGGGTGCCTTCATGATTTGGAACCCATATGGTGGGATGATGAGTAAGATACCAGAGTCTCAGATCCCATTTCCTCACAGAAACGGGACCATGTGCATGATCCAATATGTGGTAACTTGGATGGATGGTAAGGCTAGTGAAAGTAGGCATATGGAATGGATTAGGAAGCTACACAACTACATGGCCCTTTATGTGTCAAAGCTTCCTCGGGAAGCATATGTTAATTATAGGGACCTCGATTTGGGCATGACCAAAGATGGGAACACTAGCTTCATACAGGCGAGTTCTTGGGGAACCATGTACTACAAGGACAATTACAATAAGCTAGTGAAGATCAAGACAAGGTTTGACCCAAGTAACTTCTTCAGACATGAACAGAGCATCCCACCTCTTCCAGTTATGGAGAGCGGAGGAAATATTCAGTGGGATACATCTGATGACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_19602.p1 GENE.S_Transcript_19602~~S_Transcript_19602.p1 ORF type:complete len:565 (+),score=90.93,FAD_binding_4|PF01565.19|2e-26,BBE|PF08031.8|1.3e-22 S_Transcript_19602:1803-3497(+)
MPKGIHFPSETFFTMKNNLIMCSSTSKFLSGLMILAIFASWASADSIQDNFLQCLYKNVRPQATLPLSYYMPNNSSFSIVLQSTAQNLRYLMPSVRKPELIVMPTDESHIQGAVICAKKVGVQLRVRSGGHDYEGVSYASEMEEPFIILDMAKLRTVTVHIEDNSAWVEAGATIGELYYHISRESKVHGFPAGLCTSLGVGGHITGGAYGPMMRKYGLGADNAIDVKMVDANGQVLDRKSMGEDLFWAIRGGGGGNFGIILAWKIQLVPVPEKVTVFTVAKTLEQGLTKILYKWQNVADKIDENLFIRVMFQNSKNQKGEKTVIGLFQALYLGQADQLLKVMQRDFPELGLGKKDVSEVSWIESVLYIAGYPSGTKPEVLLEAKPMFTNYFKAKSDFVRDPIPESGLEGLWKRYMEDEGAFMIWNPYGGMMSKIPESQIPFPHRNGTMCMIQYVVTWMDGKASESRHMEWIRKLHNYMALYVSKLPREAYVNYRDLDLGMTKDGNTSFIQASSWGTMYYKDNYNKLVKIKTRFDPSNFFRHEQSIPPLPVMESGGNIQWDTSDD*

Click here to download the sequence:
Link to NCBI Protein BLAST