Transcript Information: S_Transcript_19603.p2


Annotated TAIR IDAT5G44400.1
Annotated Gene NameFAD-binding Berberine family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:17886365-17888071 | Reverse length=537
E-Value7.4E-116
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.4306310879479
Replicate 20.57120490763792
Replicate 30.59685230044015
Condition 2: 8 Hour
Replicate 10.27605683258425
Replicate 20.50680563261517
Replicate 30.68983325582464
Condition 3: 24 Hour
Replicate 10.56556332661733
Replicate 21.5402590391692
Replicate 31.1427463484519


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_19603.p2 GENE.S_Transcript_19603~~S_Transcript_19603.p2 ORF type:complete len:309 (+),score=40.80,FAD_binding_4|PF01565.19|5.9e-27 S_Transcript_19603:1769-2695(+)
ATGCCAAAGGGTATTCATTTCCCCTCAGAGACATTCTTCACAATGAAGAACAACTTGATAATGTGTTCAAGCACCTCAAAATTTCTATCAGGTTTGATGATTCTTGCAATATTTGCCTCTTGGGCATCTGCTGATTCCATCCAAGATAATTTCCTCCAATGCCTATATAAAAATGTTAGGCCCCAGGCCACACTTCCCCTATCATATTACATGCCAAACAACTCTTCCTTTTCAATTGTCCTGCAATCTACCGCTCAAAACCTTAGGTATCTGATGCCTTCTGTGCGGAAACCTGAACTAATTGTAATGCCAACGGACGAATCCCACATCCAAGGTGCCGTTATATGTGCAAAAAAAGTTGGTGTTCAGCTTAGAGTTCGTAGTGGGGGCCATGACTATGAAGGGGTTTCCTATGCATCTGAGATGGAGGAACCATTTATCATCCTCGACATGGCCAAGCTGCGAACGGTGACCGTTCATATTGAAGATAATAGTGCATGGGTGGAGGCAGGGGCCACTATCGGTGAACTCTACTATCACATCTCTCGGGAGAGCAAGGTCCATGGCTTCCCTGCTGGCCTCTGCACTAGCTTGGGTGTGGGAGGACACATCACAGGAGGAGCCTATGGCCCTATGATGAGAAAATATGGCCTTGGAGCTGACAATGCTATTGATGTCAAGATGGTCGATGCCAACGGTCAAGTACTAGACCGAAAATCAATGGGAGAGGATTTATTCTGGGCCATTAGAGGAGGTGGAGGGGGTAACTTTGGGATCATCCTTGCATGGAAGATTCAGTTAGCCCCCGTGCCAGAAAAAGCGACAGTTTTTACTGTTGCTAAAACCTTGGAACAAGGCTTACAAAGATCCTGTATAAATGGCAGAATGTTGCTGACAAGATTGATGAAAATCTGTTCATCAGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_19603.p2 GENE.S_Transcript_19603~~S_Transcript_19603.p2 ORF type:complete len:309 (+),score=40.80,FAD_binding_4|PF01565.19|5.9e-27 S_Transcript_19603:1769-2695(+)
MPKGIHFPSETFFTMKNNLIMCSSTSKFLSGLMILAIFASWASADSIQDNFLQCLYKNVRPQATLPLSYYMPNNSSFSIVLQSTAQNLRYLMPSVRKPELIVMPTDESHIQGAVICAKKVGVQLRVRSGGHDYEGVSYASEMEEPFIILDMAKLRTVTVHIEDNSAWVEAGATIGELYYHISRESKVHGFPAGLCTSLGVGGHITGGAYGPMMRKYGLGADNAIDVKMVDANGQVLDRKSMGEDLFWAIRGGGGGNFGIILAWKIQLAPVPEKATVFTVAKTLEQGLQRSCINGRMLLTRLMKICSSE*

Click here to download the sequence:
Link to NCBI Protein BLAST