Transcript Information: S_Transcript_196239.p1


Annotated TAIR IDAT2G46280.1
Annotated Gene NameTGF-beta receptor interacting protein 1
Annotated Gene Symbol(s)TRIP-1, TIF3I1
Annotation TypeOrtholog
Chromosome Positionchr2:19003656-19005393 | Reverse length=328
E-Value1.7E-193
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 163.389761736058
Replicate 257.706944546163
Replicate 355.281869717928
Condition 2: 8 Hour
Replicate 163.065287445391
Replicate 256.266885649162
Replicate 358.216900368379
Condition 3: 24 Hour
Replicate 152.636289616783
Replicate 250.965103921686
Replicate 355.450474508735


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_196239.p1 GENE.S_Transcript_196239~~S_Transcript_196239.p1 ORF type:5prime_partial len:398 (+),score=84.89,WD40|PF00400.28|16,WD40|PF00400.28|1.3e-06,WD40|PF00400.28|0.87,WD40|PF00400.28|8.3e-05,WD40|PF00400.28|1.6e+04,WD40|PF00400.28|0.00052 S_Transcript_196239:2-1195(+)
TCGAACTTACTTATTCTCAGCTTTTCTCAGACCGCCCCCAAACTCTACTACCCTTCCAGAAAAATAAACCCTCCTTCTTCCTCAGTTCCCTCTCTCCTCTCTTTTTTGCCGCCGACGTCATCATCTTCTGATTTTCTCTCTCATCACCACCAATTTCTTGTTATTCTTCATAGTAGAGAAAGAAGAAGAAGAACAACAAAAAAAGCAAAGATGAGGCCAATATTGATGAAAGGCCATGAAAGGCCATTGACATTCTTGAAGTTCAACAGAGATGGAGATTTGTTATTCTCCTGTGCTAAGGACCACACTCCAACTGTGTGGTTCGCTGATAATGGAGAGCGTCTCGGCACTTACAAGGGTCACAACGGAGCAGTCTGGACTTGCTCCTGCTCCTGGGATTCTTCTCGCCTTCTCACTGGTAGTGCAGATCAGACAGCAAAGTTGTGGGATGTTCAAACTGGAAAATCATTGTACACATTTGTTTTTGACTCTCCTGCTAGGTCTGTGGACTTCTCTGTTGGTGATAAGCTTGCTGTTGTAACCACTGATCCATTCATGGAAAAGACGTCTGCCATCCATGTGAAGCGCATTGCAGATGATGTTGACGAACAAACTGAAGAATCTGTTCTCGTCATGAGGGGCCCAAGTGGCCGAATTAATAGAGCTGTGTGGGGGCCTTTGAACAAGTTTATTATTAGTGCTGGCGAGGATGCTATCATTCGTATGTGGGATCCTGTGACAGGCCAAGAGATAATGTCAACAAGAGAACATGAAAATAGACACAAGAAAACAATTACATCACTGTGCCTATCTGCAGACGGGTCACATTTTCTCACAGGTTCACTAGATAAATCAGCTAAGCTGTGGGATACCAGAACTTTGACCCTTATAAAGACATACAATACAGAGCGGCCGGTCAATGCTGTTACCATGTCTCCTCTTCTTGACCATGTTGTGCTTGGAGGTGGTCAAGATGCTTCAGCTGTGACAACTACAGATCATCGTGCAGGAAAATTTGAAGCCAAATTTTATGACAAGATTCTCCAGGAAGAAATTGGTGGTGTGAAAGGTCACTTTGGGCCTATAAATGCCCTGGCATTCAATCCTGATGGCAAAAGTTTTGCCAGTGGGGGTGAAGATGGTTATGTGAGGCTGCACCATTTCGACCCTGATTATTTCAATATCAAGATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_196239.p1 GENE.S_Transcript_196239~~S_Transcript_196239.p1 ORF type:5prime_partial len:398 (+),score=84.89,WD40|PF00400.28|16,WD40|PF00400.28|1.3e-06,WD40|PF00400.28|0.87,WD40|PF00400.28|8.3e-05,WD40|PF00400.28|1.6e+04,WD40|PF00400.28|0.00052 S_Transcript_196239:2-1195(+)
SNLLILSFSQTAPKLYYPSRKINPPSSSVPSLLSFLPPTSSSSDFLSHHHQFLVILHSRERRRRTTKKAKMRPILMKGHERPLTFLKFNRDGDLLFSCAKDHTPTVWFADNGERLGTYKGHNGAVWTCSCSWDSSRLLTGSADQTAKLWDVQTGKSLYTFVFDSPARSVDFSVGDKLAVVTTDPFMEKTSAIHVKRIADDVDEQTEESVLVMRGPSGRINRAVWGPLNKFIISAGEDAIIRMWDPVTGQEIMSTREHENRHKKTITSLCLSADGSHFLTGSLDKSAKLWDTRTLTLIKTYNTERPVNAVTMSPLLDHVVLGGGQDASAVTTTDHRAGKFEAKFYDKILQEEIGGVKGHFGPINALAFNPDGKSFASGGEDGYVRLHHFDPDYFNIKI*

Click here to download the sequence:
Link to NCBI Protein BLAST