Transcript Information: S_Transcript_196518.p1


Annotated TAIR IDAT5G67385.1
Annotated Gene NamePhototropic-responsive NPH3 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26884754-26887083 | Forward length=604
E-Value8.8E-236
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 133.9939507965
Replicate 236.369129661216
Replicate 337.461807669814
Condition 2: 8 Hour
Replicate 123.824459494922
Replicate 224.294429382203
Replicate 324.729713822967
Condition 3: 24 Hour
Replicate 145.695059020364
Replicate 243.955400186158
Replicate 341.52770201858


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_196518.p1 GENE.S_Transcript_196518~~S_Transcript_196518.p1 ORF type:complete len:512 (-),score=114.74,NPH3|PF03000.10|9.7e-84 S_Transcript_196518:133-1668(-)
ATGCTTCGCTGTGTGGCTGAGTATCTCGAGATGACAGAGGATAATGCGGTTGGAAACCTTATTGGAAGGGCAGAGGCTTACTTGAATGAAGTAGCTCTTAAGAGCCTATCCACTTGTGTTTCGGTTCTGCTTGCCTCGGAAAACCTCCTGCCTATGGCAGAGCAAATTAAGTTGGTGGGCCGTTGCATTGATGCAATAGCTTATTTAGCCTGCAAGGATAGCCAATTTTCAGGTACGAGCAGGGCTGAAGCTGGCATTGAAGGTGGAAACTCCTCGTTAGTTCCTCAACAAAAACCCATTGTGGATTGGTGGGCTGAAGATGTGACTATGCTTAGAATAGATATGTTCCAAAGGGTTCTGATAGCTATGACGGCTAGAGGATTTAAGCAATATGCTCTTGGTCCCATCCTCATGCTCTATGCTCAAAAGTCTCTAAGAGGTTTGGAAGCCTTTGGGAAGGGAAGAAAGAAAATTGAGCCCAAGCAAGAACATGAAAAGAGGGTTGTGTTAGAGACCATTGTGAGCCTGCTACCTAGGGAGAGAAATGCATTGTCAGTGAGCTTCCTTTCCATGCTGCTTCGCTCTTCAATATATCTGGAGACAACAGATGCTTGCCGGCTTGATTTGGAGAAAAGGATGGCCTTACAACTCAGTCAGGCTGTTCTAGATGACCTTTTGATTCCTTCATATTCTTTTACTGGGGATACTTTGTTTGATGTAGATACAGTCAGGAGAATCATGATGAACTATTTTGAGTATGAAGTGGAGGGAAATCATCGCCTGGGATATGGTTCAGGAGAAGAACATTTTGCTCCTCCTAATGATTTGGAGAGGGTCGGTAAGTTGATGGAGAATTACCTGGCTGAGATAGCTTCTGACCGCAACATGACTGTTTCTAAGTTCATTGGCCTTGCCGAGCTTGTTCCCGAACAATCAAGGGTCACAGAGGATGGAATGTATAGAGCAATTGATATCTTCCTCAAGGCTCATCCTAGCCTGAGTGATATGGAGAGGAAGAAAGTATGCAACCTGATGGACTGTCAGAAGCTATCTCGGGAGGCCTGTGCCCATGCAGCTCAAAACGACCGACTGCCTGTGCAAACAGTTGTGCAAGTCCTCTACTATGAACAGAAACGCCTCCGAGAAACCATGAATGGCAACGGAGAATCTCCTTCAGCCGCTATTATTCCTAGCAAATCACTGAGTCTATATCCAACTGATACACCCTCCTCAGATCATGAGGTCCAGAACCTGAAAAGAGAGAACCAGGACCTGAAACTTGAGCTTCTCAAACTGAAGATGAAGTTAAAGGAAATTGAGAAACCAGGGCCAGGAGTTAACAATAAGTCTACGACAATTAGCAGCCCAGCTGCAAGTAGTGTTTCATCTGCTGATCAGAAGCCTCCTTTTCCTCGCAAGTCATTCATAAGCTCAGTATCTAAGAAACTGGGCCGCTTGCTTCTTCATGGTGATGTATTGGCACCTTCTAAGGGACGGGTTAAGGCTGGTAAAGATCGCCGCCATTCCATCTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_196518.p1 GENE.S_Transcript_196518~~S_Transcript_196518.p1 ORF type:complete len:512 (-),score=114.74,NPH3|PF03000.10|9.7e-84 S_Transcript_196518:133-1668(-)
MLRCVAEYLEMTEDNAVGNLIGRAEAYLNEVALKSLSTCVSVLLASENLLPMAEQIKLVGRCIDAIAYLACKDSQFSGTSRAEAGIEGGNSSLVPQQKPIVDWWAEDVTMLRIDMFQRVLIAMTARGFKQYALGPILMLYAQKSLRGLEAFGKGRKKIEPKQEHEKRVVLETIVSLLPRERNALSVSFLSMLLRSSIYLETTDACRLDLEKRMALQLSQAVLDDLLIPSYSFTGDTLFDVDTVRRIMMNYFEYEVEGNHRLGYGSGEEHFAPPNDLERVGKLMENYLAEIASDRNMTVSKFIGLAELVPEQSRVTEDGMYRAIDIFLKAHPSLSDMERKKVCNLMDCQKLSREACAHAAQNDRLPVQTVVQVLYYEQKRLRETMNGNGESPSAAIIPSKSLSLYPTDTPSSDHEVQNLKRENQDLKLELLKLKMKLKEIEKPGPGVNNKSTTISSPAASSVSSADQKPPFPRKSFISSVSKKLGRLLLHGDVLAPSKGRVKAGKDRRHSIS*

Click here to download the sequence:
Link to NCBI Protein BLAST