Transcript Information: S_Transcript_196696.p1


Annotated TAIR IDAT5G17160.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03130.1); Has 14330 Blast hits to 10381 proteins in 896 species: Archae - 94; Bacteria - 2881; Metazoa - 4019; Fungi - 1576; Plants - 515; Viruses - 110; Other Eukaryotes - 5135 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:5639843-5642427 | Reverse length=569
E-Value5.9E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.34000350010103
Replicate 20.20499688322894
Replicate 30.19278121341743
Condition 2: 8 Hour
Replicate 10.34675431409972
Replicate 20.23385207637345
Replicate 30.61892705008657
Condition 3: 24 Hour
Replicate 10.22834372986684
Replicate 20
Replicate 30.29293895940901


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_196696.p1 GENE.S_Transcript_196696~~S_Transcript_196696.p1 ORF type:3prime_partial len:861 (+),score=258.60 S_Transcript_196696:143-2722(+)
ATGGATTTCCACAGCCTGAAGAGACGTGATCTCCAAGCCTTGTGCAAGAAAAACAATATCCCTGCTAACATGACTAATGCCTCCATGGCCGATGCTCTTGCTTCTCTGAATATCGTTGAAGGTGTTGAAGAGTATTTGAGACAATCAGAGATGGTAGGGTCAGAATCCCCAGAAAGATCTGTGATAACTTCCCCAAGTGCACCCCGAACATCAACCCGTCAGAAAGCCAGTAAGGAAGTGCTAGAATGCTCCAACTTGACCACAAGAACTCGCTGTGGAACCAGGAGAAGAGCTGTAGAAGGAACTGATGCCAAAAAGACTACAACCACGCGTACTACACGAAGAAGGGCACCCCAAGAGTCCTCCACTCAGCAAAAGACGGAGGAAGATTTGCAGGCCAAGTTTGAGGCTGATTTGGAGCAATCTGATGTTTCAGAGAACAATGGCCTGCATAGTGAATCCACTGAAGTATCTGAGGTTTCAGGAGTCAGTGTGGATCAAAGAGGTATCCAAAATGAGCCTGAAGATGAGGTACCAGACGTTAATGAGGAAGTGCATGTGGGAAATGACCCCAAAGACAGCAGGGAGGAAGACCATGTTGCTATTGACGCACCTCAAGGGTCCACTGAGACCTTCAGTAGTACTAGTACTCAGAAGGTGGACTTCCACAGCCTCAGTAGGAAGGAACTCCAAAACCTCTGTAAGAAGAACAAGATCCCTGCAAATATCAGCAATGCTGCAATGGTTGATGCCCTTGAGTCTCTTGAGAGAGTTGAAGGACTTGAAGAGCTTCTGAACAAGTCTGACTGTCTTACTGCAAAGTCACCTGAAATGTCAAGGATGACTTCAACTCGGGTTCGCCAAACACGTACTTGTCAGAAAAGCACTCGGCGAAAGCCTGCATATGCTGGTTCTGCACTTGGTAAGGTTGAAACTGTACAGAAAAAGGAAGACAGTGTAGTGCAAAGTTTGGCAAAGAAGATTGAGTCAAATATGGAGGACACAGAATGTCCTGCTTCTGTTACTACTGGTAAAGATGGTCAAGGGGAGAATGATCTGCAGAGTCATTTTGAGCTGTGCCTGGAGAAGTCTGAAGTTTCGGATCTTGTCTCTGAGAATAGTAGCAGCAATAATGCTGAAACAAAATCTACGTCACTACCAGAAGAGGTTTCAGATGAATCTGAGACTTCAAGGGTTGTAATGGAGACTGAAGAGGAAGATCGGGATGATGTGATAGGAAACAAGTTTGGTGGGGGAAAGAGTAATGACACTGAGACTGAAGTGTGTGACTTTAGTAAGGAACCAGTAGCAGCTGCAGACAATTTTGTCGGCCGAAATACTGATGACGAAGTGAAGCCAAAAGAAGATCAGTTTCCAGCTGATATTTTGGGACAAAAGGAAAGCAACTTATTAGAGAGTGAAGATACAATTGACAGTGATTCCTTGGAAATTAAGGTTGATGGTCAAGAAGTTAACATCGAAATTTCCGAGGAAGGTGATACCACTGTGGTAGTAGAATCAGAGTCAAATGTTGATGAAGGATTGCTGCAAGAAGCACCAGTAGAGAACGACAAAAGTGTAGAGGTTTTTGAAGTTACAGGTGCTGAAGATTCAAACGTTGCCGAACACTTCAGTGACAGTTTTAAGCGAGTGGCTGATTGTGCCACTGAAGATGAGGACCTGAAATTCGATTCTGTTTCAGTTACGGAATTCTCAAATGATGCTCAAGAATCTGAATCAAGTAGTTTGGATATTGTCAATGTGGACAAAGAGCTTGAGAACTGTCAGCAAGAGCTTGAGAATCCTGCACATGACTATCCAGTTGAGAAGGTTGAGGGTATCCATGCAGAAGATCAGATGGCCAATGCAGTTGATTCTGAGTCAACTACTCAAACTGATCAACTTGCACCTATTGTAGAGGGAACCCCTCTGTGTCATAAGAGCCTCCGAACACTGAAGAAGATGCTGAAAAAGAGACTTCAGGATACAACGCTGGCAAATAAAATGGAAAAGTTGAGTTTGGATGAGAGTGAAATTCTGCTTGGAAGTGAAAATTCTGATGCTGAGCTGACAAAGGAAGTGGGAGAAGATCTGAAGCACGAATTTCAGGAAATCAACAAGGAATCTGATGGACTTGCCAATAAGGGAGTGTCATGGATTGATGATGCTCGAGTTCCTCCAGTAAATTCGAGAAACAGTGCAATTGATAATGACAATGGAAAAATCACAAGTATGCTCAAGGATGAAGGACTCTCTAGTGATCAGATTAACGGCAGCTCTGAGAATCTGGCCATCAATTCCATTGTTGATGCTGAAGTCAACGTCGAATCTGTCAATTTCGATGATGTTGCACCTGAAGAATCTAAACAAAAGGCTGATGAAGCGCAATTTAGTGTCATCGAGTCAGACGATATCACATATCCAAAAGTTACCCCAACCAAATCTTCAAGAAAGACACATAAGCCACTGCTCTTTACACCAAGCAAATGTTCAAGCAAGACACCCAAGTCAGCTGGAAGGACAACCTGTGTATCGGATATCAACAAGGAGAACATTGACAACAGTGCCAGTAAAACAGGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_196696.p1 GENE.S_Transcript_196696~~S_Transcript_196696.p1 ORF type:3prime_partial len:861 (+),score=258.60 S_Transcript_196696:143-2722(+)
MDFHSLKRRDLQALCKKNNIPANMTNASMADALASLNIVEGVEEYLRQSEMVGSESPERSVITSPSAPRTSTRQKASKEVLECSNLTTRTRCGTRRRAVEGTDAKKTTTTRTTRRRAPQESSTQQKTEEDLQAKFEADLEQSDVSENNGLHSESTEVSEVSGVSVDQRGIQNEPEDEVPDVNEEVHVGNDPKDSREEDHVAIDAPQGSTETFSSTSTQKVDFHSLSRKELQNLCKKNKIPANISNAAMVDALESLERVEGLEELLNKSDCLTAKSPEMSRMTSTRVRQTRTCQKSTRRKPAYAGSALGKVETVQKKEDSVVQSLAKKIESNMEDTECPASVTTGKDGQGENDLQSHFELCLEKSEVSDLVSENSSSNNAETKSTSLPEEVSDESETSRVVMETEEEDRDDVIGNKFGGGKSNDTETEVCDFSKEPVAAADNFVGRNTDDEVKPKEDQFPADILGQKESNLLESEDTIDSDSLEIKVDGQEVNIEISEEGDTTVVVESESNVDEGLLQEAPVENDKSVEVFEVTGAEDSNVAEHFSDSFKRVADCATEDEDLKFDSVSVTEFSNDAQESESSSLDIVNVDKELENCQQELENPAHDYPVEKVEGIHAEDQMANAVDSESTTQTDQLAPIVEGTPLCHKSLRTLKKMLKKRLQDTTLANKMEKLSLDESEILLGSENSDAELTKEVGEDLKHEFQEINKESDGLANKGVSWIDDARVPPVNSRNSAIDNDNGKITSMLKDEGLSSDQINGSSENLAINSIVDAEVNVESVNFDDVAPEESKQKADEAQFSVIESDDITYPKVTPTKSSRKTHKPLLFTPSKCSSKTPKSAGRTTCVSDINKENIDNSASKTG

Click here to download the sequence:
Link to NCBI Protein BLAST