Transcript Information: S_Transcript_196697.p1


Annotated TAIR IDAT5G17160.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03130.1); Has 14330 Blast hits to 10381 proteins in 896 species: Archae - 94; Bacteria - 2881; Metazoa - 4019; Fungi - 1576; Plants - 515; Viruses - 110; Other Eukaryotes - 5135 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5639843-5642427 | Reverse length=569
E-Value2E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3019684612709
Replicate 21.6989278878677
Replicate 31.4007141329317
Condition 2: 8 Hour
Replicate 11.7321255848304
Replicate 20.66077190075142
Replicate 31.3715893501096
Condition 3: 24 Hour
Replicate 10.36869001671889
Replicate 20.81283712404621
Replicate 31.0642212829163


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_196697.p1 GENE.S_Transcript_196697~~S_Transcript_196697.p1 ORF type:complete len:948 (+),score=286.69 S_Transcript_196697:143-2986(+)
ATGGATTTCCACAGCCTGAAGAGACGTGATCTCCAAGCCTTGTGCAAGAAAAACAATATCCCTGCTAACATGACTAATGCCTCCATGGCCGATGCTCTTGCTTCTCTGAATATCGTTGAAGGTGTTGAAGAGTATTTGAGACAATCAGAGATGGTAGGGTCAGAATCCCCAGAAAGATCTGTGATAACTTCCCCAAGTGCACCCCGAACATCAACCCGTCAGAAAGCCAGTAAGGAAGTGCTAGAATGCTCCAACTTGACCACAAGAACTCGCTGTGGAACCAGGAGAAGAGCTGTAGAAGGAACTGATGCCAAAAAGACTACAACCACGCGTACTACACGAAGAAGGGCACCCCAAGAGTCCTCCACTCAGCAAAAGACGGAGGAAGATTTGCAGGCCAAGTTTGAGGCTGATTTGGAGCAATCTGATGTTTCAGAGAACAATGGCCTGCATAGTGAATCCACTGAAGTATCTGAGGTTTCAGGAGTCAGTGTGGATCAAAGAGGTATCCAAAATGAGCCTGAAGATGAGGTACCAGACGTTAATGAGGAAGTGCATGTGGGAAATGACCCCAAAGACAGCAGGGAGGAAGACCATGTTGCTATTGACGCACCTCAAGGGTCCACTGAGACCTTCAGTAGTACTAGTACTCAGAAGGTGGACTTCCACAGCCTCAGTAGGAAGGAACTCCAAAACCTCTGTAAGAAGAACAAGATCCCTGCAAATATCAGCAATGCTGCAATGGTTGATGCCCTTGAGTCTCTTGAGAGAGTTGAAGGACTTGAAGAGCTTCTGAACAAGTCTGACTGTCTTACTGCAAAGTCACCTGAAATGTCAAGGATGACTTCAACTCGGGTTCGCCAAACACGTACTTGTCAGAAAAGCACTCGGCGAAAGCCTGCATATGCTGGTTCTGCACTTGGTAAGGTTGAAACTGTACAGAAAAAGGAAGACAGTGTAGTGCAAAGTTTGGCAAAGAAGATTGAGTCAAATATGGAGGACACAGAATGTCCTGCTTCTGTTACTACTGGTAAAGATGGTCAAGGGGAGAATGATCTGCAGAGTCATTTTGAGCTGTGCCTGGAGAAGTCTGAAGTTTCGGATCTTGTCTCTGAGAATAGTAGCAGCAATAATGCTGAAACAAAATCTACGTCACTACCAGAAGAGGTTTCAGATGAATCTGAGACTTCAAGGGTTGTAATGGAGACTGAAGAGGAAGATCGGGATGATGTGATAGGAAACAAGTTTGGTGGGGGAAAGAGTAATGACACTGAGACTGAAGTGTGTGACTTTAGTAAGGAACCAGTAGCAGCTGCAGACAATTTTGTCGGCCGAAATACTGATGACGAAGTGAAGCCAAAAGAAGATCAGTTTCCAGCTGATATTTTGGGACAAAAGGAAAGCAACTTATTAGAGAGTGAAGATACAATTGACAGTGATTCCTTGGAAATTAAGGTTGATGGTCAAGAAGTTAACATCGAAATTTCCGAGGAAGGTGATACCACTGTGGTAGTAGAATCAGAGTCAAATGTTGATGAAGGATTGCTGCAAGAAGCACCAGTAGAGAACGACAAAAGTGTAGAGGTTTTTGAAGTTACAGGTGCTGAAGATTCAAACGTTGCCGAACACTTCAGTGACAGTTTTAAGCGAGTGGCTGATTGTGCCACTGAAGATGAGGACCTGAAATTCGATTCTGTTTCAGTTACGGAATTCTCAAATGATGCTCAAGAATCTGAATCAAGTAGTTTGGATATTGTCAATGTGGACAAAGAGCTTGAGAACTGTCAGCAAGAGCTTGAGAATCCTGCACATGACTATCCAGTTGAGAAGGTTGAGGGTATCCATGCAGAAGATCAGATGGCCAATGCAGTTGATTCTGAGTCAACTACTCAAACTGATCAACTTGCACCTATTGTAGAGGGAACCCCTCTGTGTCATAAGAGCCTCCGAACACTGAAGAAGATGCTGAAAAAGAGACTTCAGGATACAACGCTGGCAAATAAAATGGAAAAGTTGAGTTTGGATGAGAGTGAAATTCTGCTTGGAAGTGAAAATTCTGATGCTGAGCTGACAAAGGAAGTGGGAGAAGATCTGAAGCACGAATTTCAGGAAATCAACAAGGAATCTGATGGACTTGCCAATAAGGGAGTGTCATGGATTGATGATGCTCGAGTTCCTCCAGTAAATTCGAGAAACAGTGCAATTGATAATGACAATGGAAAAATCACAAGTATGCTCAAGGATGAAGGACTCTCTAGTGATCAGATTAACGGCAGCTCTGAGAATCTGGCCATCAATTCCATTGTTGATGCTGAAGCTCAATATGCAGTCAACATTCTTGAGGATAATGAAATTTCTGAAGCTTCTGTTGTTGGACATGTCAATGTCGAATCTGTCAATTTCGATGACGTTGCACCTAAAGAATCTAAAGAAAAGGTTGATGAAGCGCAATTTAGAATCATCGAGTCAGACGATATCACATATCCAAAAGTTACCCCAACCAAATCTTCAAGAAAGACACATAAGCCACTGCTCTTTACACCAAGCAAATGTTCAAGCAAGACACCCAAGTCAGCTGGAAGGACAACCTGTGTATCGGATATCAACAAGGAGAACATTGACAACAGTGCCAGTAAAACAGGACCAGGAAAGGTCATTGAGTCAGAACATTGGATATCAGCTGGAAAGACACATATTGCTGTTGTTGGAAGTGGAAAATTGTTTTCTGCTATGAGCATGGGAAAGCTAAAGAAGGAATTCAAAGTGCTCCAGCAACAGTCAGAGAGAAAGAGGCCTGCATTACAATCAAGGTCAGAAAATCAGTGCCCCTTGGCAAGCCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_196697.p1 GENE.S_Transcript_196697~~S_Transcript_196697.p1 ORF type:complete len:948 (+),score=286.69 S_Transcript_196697:143-2986(+)
MDFHSLKRRDLQALCKKNNIPANMTNASMADALASLNIVEGVEEYLRQSEMVGSESPERSVITSPSAPRTSTRQKASKEVLECSNLTTRTRCGTRRRAVEGTDAKKTTTTRTTRRRAPQESSTQQKTEEDLQAKFEADLEQSDVSENNGLHSESTEVSEVSGVSVDQRGIQNEPEDEVPDVNEEVHVGNDPKDSREEDHVAIDAPQGSTETFSSTSTQKVDFHSLSRKELQNLCKKNKIPANISNAAMVDALESLERVEGLEELLNKSDCLTAKSPEMSRMTSTRVRQTRTCQKSTRRKPAYAGSALGKVETVQKKEDSVVQSLAKKIESNMEDTECPASVTTGKDGQGENDLQSHFELCLEKSEVSDLVSENSSSNNAETKSTSLPEEVSDESETSRVVMETEEEDRDDVIGNKFGGGKSNDTETEVCDFSKEPVAAADNFVGRNTDDEVKPKEDQFPADILGQKESNLLESEDTIDSDSLEIKVDGQEVNIEISEEGDTTVVVESESNVDEGLLQEAPVENDKSVEVFEVTGAEDSNVAEHFSDSFKRVADCATEDEDLKFDSVSVTEFSNDAQESESSSLDIVNVDKELENCQQELENPAHDYPVEKVEGIHAEDQMANAVDSESTTQTDQLAPIVEGTPLCHKSLRTLKKMLKKRLQDTTLANKMEKLSLDESEILLGSENSDAELTKEVGEDLKHEFQEINKESDGLANKGVSWIDDARVPPVNSRNSAIDNDNGKITSMLKDEGLSSDQINGSSENLAINSIVDAEAQYAVNILEDNEISEASVVGHVNVESVNFDDVAPKESKEKVDEAQFRIIESDDITYPKVTPTKSSRKTHKPLLFTPSKCSSKTPKSAGRTTCVSDINKENIDNSASKTGPGKVIESEHWISAGKTHIAVVGSGKLFSAMSMGKLKKEFKVLQQQSERKRPALQSRSENQCPLASP*

Click here to download the sequence:
Link to NCBI Protein BLAST