Transcript Information: S_Transcript_196788.p1


Annotated TAIR IDAT4G02360.1
Annotated Gene NameProtein of unknown function, DUF538
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:1041179-1041643 | Forward length=154
E-Value4.1E-53
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 122.062591697559
Replicate 221.033954811309
Replicate 317.104921030904
Condition 2: 8 Hour
Replicate 114.80622954661
Replicate 220.864936555185
Replicate 315.351828067836
Condition 3: 24 Hour
Replicate 123.655858287742
Replicate 222.898669727398
Replicate 323.000413550779


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_196788.p1 GENE.S_Transcript_196788~~S_Transcript_196788.p1 ORF type:5prime_partial len:193 (+),score=36.44,DUF538|PF04398.8|6.4e-37 S_Transcript_196788:1-579(+)
CCTTTACTTAACCCCACACAATTCACATACCAAAGCAAACAATCCCCTAAAACAAACCAAAAAAAAAAAAAAAAACCCAAAATGAGTCCATCAATCAACCTCTCCCTTTCTCTGCTCCTACTATCACTAATCTCATCAACAATCTCTCATTCAGATGGCCTCACAGCCTATGACATGCTACAAAAGTATGATTTCCCAGTGGGTATTCTCCCAAATGGGGTCACAGACTATGAGCTCAACAAACAAACTGGTGAGTTCAAGGTTTTCTTCACTGGGACCTGCAAATTCCACATTGACAACTATGAATTGGAGTACAAATCCACCATTTCTGGCGTTATATCAAAGGACAAGATTTCCAGTCTTAAAGGGGTTAGTGTGAAAGTCCTGTTTTTCTGGATTAATATTGTTGAAGTTGAAAAAACTGATGATGAACTTCAGTTCTCTGTTGGGATTGCTTCTGCTAATTTCCCACTTGATGGGTTTGTTGAATCTCCCACTTGTGGATGTGGGTTTGATTGTAATGGGTTGAAGAAGAAGGAGGGTGATGAAAGACTTGATCTTTTGGTTTCTTTTTCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_196788.p1 GENE.S_Transcript_196788~~S_Transcript_196788.p1 ORF type:5prime_partial len:193 (+),score=36.44,DUF538|PF04398.8|6.4e-37 S_Transcript_196788:1-579(+)
PLLNPTQFTYQSKQSPKTNQKKKKKPKMSPSINLSLSLLLLSLISSTISHSDGLTAYDMLQKYDFPVGILPNGVTDYELNKQTGEFKVFFTGTCKFHIDNYELEYKSTISGVISKDKISSLKGVSVKVLFFWINIVEVEKTDDELQFSVGIASANFPLDGFVESPTCGCGFDCNGLKKKEGDERLDLLVSFS*

Click here to download the sequence:
Link to NCBI Protein BLAST