Transcript Information: S_Transcript_196898.p1


Annotated TAIR IDAT4G02730.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:1207759-1209066 | Forward length=333
E-Value8.8E-165
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.932721522025
Replicate 28.2735460840681
Replicate 37.0342486985528
Condition 2: 8 Hour
Replicate 18.5438262488514
Replicate 210.325468602951
Replicate 37.1736025593687
Condition 3: 24 Hour
Replicate 17.4916747868384
Replicate 29.4432548234781
Replicate 38.4073481350387


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_196898.p1 GENE.S_Transcript_196898~~S_Transcript_196898.p1 ORF type:complete len:312 (-),score=25.50,WD40|PF00400.28|0.0014,WD40|PF00400.28|5.9e-07,WD40|PF00400.28|4.3e-08,WD40|PF00400.28|1.4e-09,WD40|PF00400.28|97,WD40|PF00400.28|4.6e-06,WD40|PF00400.28|6.3e-05,WD40_like|PF17005.1|0.2,WD40_like|PF17005.1|0.15,WD40_like|PF17005.1|0.00029,WD40_like|PF17005.1|25,eIF2A|PF08662.7|2.9,eIF2A|PF08662.7|2e-05,eIF2A|PF08662.7|5.9,Nup160|PF11715.4|0.014,Nup160|PF11715.4|0.91,Nup160|PF11715.4|2,Nup160|PF11715.4|2.9e+02,Ge1_WD40|PF16529.1|16,Ge1_WD40|PF16529.1|8.5,Ge1_WD40|PF16529.1|0.27,Ge1_WD40|PF16529.1|60 S_Transcript_196898:302-1237(-)
ATGTCATCTGGAGGATCATCCCAAGCACCACCACCCTACCGCCCATACAAAACCCTAACAACCCACAAACGCGCCGTCTCCTGCGTAAAATTCTCCAACGACGGCGAGCTCTTAGCCTCCTCCTCCCTCGACAAAACCCTCGCAATCTTCTCCTTCCAAACCCTAACCCTAATCTCTCTCTTGACCGGCCACTCCGAGGGCATCTCCGACCTCGCCTGGTCCTCCGACAGCCACTACATCTGCTCCGCCTCCGACGACAAGACCCTCCGCATCTGGGACGCGCGCGCCGGCGACTGCGTCAAGACGCTACGCGGCCACACCGACTTTGTCTTCTGCGTCAATTTCAACCAGCCATCGAATCTCATCGTTTCGGGTTCGTTCGATGAGACGATCCGAGTCTGGGATGTGAAAACGGGTCGGGCTGTGCATGTGATTAAAGGGCATAGTTTGCCTGTGACGTCGGTGAGTTTTAACCCGGATGGGTCGTTGATTGTTTCGGGTTCTCATGACGGGACTTGTAAGATTTGGGATGCTGCTACTGGAGCTTGCTTGAAGGTCTTGATTGATGATAAACCGGGGGTTAGTTTTGCTAAGTTTTCTCCCAATGGCAAGTTCATTCTTGTTGCCACTCTTGATAATGCCCTGAAACTCTCAAACTTCCTGACTGGGAAATTCTTGAAATGTTATCAAGGTCATGCCAACAAGATTTATTGCATAACCCCAACTTTCTCAGTGACAAATGGGAAGTATATTGTAAGTGGATCAGAAGATCATTGTGTTTACCTGTGGGATCTACAGGGGAAGAACATGCTCCAAAAGCTTGAAGGTCACACTGATACTGTTGTTTCTGTAACATGCCATCCAAAGCGGAATATGATAGCCTCAGCAGGCCTGGACAAGGATAGAACTATCAGGATTTGGGTCCAGGATGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_196898.p1 GENE.S_Transcript_196898~~S_Transcript_196898.p1 ORF type:complete len:312 (-),score=25.50,WD40|PF00400.28|0.0014,WD40|PF00400.28|5.9e-07,WD40|PF00400.28|4.3e-08,WD40|PF00400.28|1.4e-09,WD40|PF00400.28|97,WD40|PF00400.28|4.6e-06,WD40|PF00400.28|6.3e-05,WD40_like|PF17005.1|0.2,WD40_like|PF17005.1|0.15,WD40_like|PF17005.1|0.00029,WD40_like|PF17005.1|25,eIF2A|PF08662.7|2.9,eIF2A|PF08662.7|2e-05,eIF2A|PF08662.7|5.9,Nup160|PF11715.4|0.014,Nup160|PF11715.4|0.91,Nup160|PF11715.4|2,Nup160|PF11715.4|2.9e+02,Ge1_WD40|PF16529.1|16,Ge1_WD40|PF16529.1|8.5,Ge1_WD40|PF16529.1|0.27,Ge1_WD40|PF16529.1|60 S_Transcript_196898:302-1237(-)
MSSGGSSQAPPPYRPYKTLTTHKRAVSCVKFSNDGELLASSSLDKTLAIFSFQTLTLISLLTGHSEGISDLAWSSDSHYICSASDDKTLRIWDARAGDCVKTLRGHTDFVFCVNFNQPSNLIVSGSFDETIRVWDVKTGRAVHVIKGHSLPVTSVSFNPDGSLIVSGSHDGTCKIWDAATGACLKVLIDDKPGVSFAKFSPNGKFILVATLDNALKLSNFLTGKFLKCYQGHANKIYCITPTFSVTNGKYIVSGSEDHCVYLWDLQGKNMLQKLEGHTDTVVSVTCHPKRNMIASAGLDKDRTIRIWVQDA*

Click here to download the sequence:
Link to NCBI Protein BLAST