Transcript Information: S_Transcript_196988.p1


Annotated TAIR IDAT4G27390.1
Annotated Gene Nameunknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:13703417-13704655 | Reverse length=235
E-Value1E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4441163460951
Replicate 21.8813231405633
Replicate 30.4289008391535
Condition 2: 8 Hour
Replicate 10.82656551616795
Replicate 20.86712591626847
Replicate 31.1566739010455
Condition 3: 24 Hour
Replicate 11.1853812746834
Replicate 20.52706538549645
Replicate 31.173118344424


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_196988.p1 GENE.S_Transcript_196988~~S_Transcript_196988.p1 ORF type:5prime_partial len:129 (+),score=4.39 S_Transcript_196988:2-388(+)
TACTATTGTGTCCCTTTGGCTGCTTGCAATAGTTTTACCAGTAGTTGGTATAGGAGCATTCCTCTGGTGGGCAGGACGAGACATGATGCAAGGCACTGTGAGATTCCATTAACTTTCTCTTTTATAGTGTCACCCGATAAGTGTTATGAATTTTACTCGACTAATTCTTCCATTCTTTCTAAAATATTGGAAGCGGAACTGTCACTGAGTTGTAATCCCTTTTTCCACTTGCTTGTTGCCCACCTCCCCCAAAAAAAAAGCTCTCCAAAAACAAATACTCTGTATCGGAGTGATCATGTTGCTATTTGTAATATGACAACACTTGCAAGAAGTTTACAAATGATCTTGTTCAATATTGTTTTTGAATGCTTTGAAAACTTTTGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_196988.p1 GENE.S_Transcript_196988~~S_Transcript_196988.p1 ORF type:5prime_partial len:129 (+),score=4.39 S_Transcript_196988:2-388(+)
YYCVPLAACNSFTSSWYRSIPLVGRTRHDARHCEIPLTFSFIVSPDKCYEFYSTNSSILSKILEAELSLSCNPFFHLLVAHLPQKKSSPKTNTLYRSDHVAICNMTTLARSLQMILFNIVFECFENFC*

Click here to download the sequence:
Link to NCBI Protein BLAST