Transcript Information: S_Transcript_196999.p2


Annotated TAIR IDAT5G46420.1
Annotated Gene Name16S rRNA processing protein RimM family
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:18829999-18832893 | Forward length=653
E-Value5E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1525221587278
Replicate 22.2711695132736
Replicate 34.3394673137884
Condition 2: 8 Hour
Replicate 14.3905215358803
Replicate 23.6189755152499
Replicate 32.8212151241887
Condition 3: 24 Hour
Replicate 11.7668655764451
Replicate 21.666456733555
Replicate 32.0400182974726


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_196999.p2 GENE.S_Transcript_196999~~S_Transcript_196999.p2 ORF type:complete len:136 (-),score=25.13 S_Transcript_196999:34-441(-)
ATGAGGGGCTCCATGCATGACACTATGCAATGGAAAAGTCTGAGTTCCTTGAAGATTTCCGAGCAACACCTTGCAAGTGTGGGCAAAGAGAAGCTAGATGCTTACTCTAATCATAGAGAAACTGGACTTCATCTCCTCTCTGAAGGCAAAGTTGCAACCGTATTAGTACTGAACAGTGGAGAACCAGAGAAATTCTCTGAGACTGATCTTGGAGATACTGAACATGGTGAACATTCAAGCATGACCGTCATTGAGACTTTACTTTTGGACATGCAAAAATTTGCAGAACACCGTGCATCTGTACCAGTTATCATGATATCCTCAGCTCAAAATGTGCAAGCACTGGAAAACGTATTTGCAAGACATGACTATTTTGGTTTCAACTCGGAAAAGGTATTTGTGTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_196999.p2 GENE.S_Transcript_196999~~S_Transcript_196999.p2 ORF type:complete len:136 (-),score=25.13 S_Transcript_196999:34-441(-)
MRGSMHDTMQWKSLSSLKISEQHLASVGKEKLDAYSNHRETGLHLLSEGKVATVLVLNSGEPEKFSETDLGDTEHGEHSSMTVIETLLLDMQKFAEHRASVPVIMISSAQNVQALENVFARHDYFGFNSEKVFVC*

Click here to download the sequence:
Link to NCBI Protein BLAST