Transcript Information: S_Transcript_19712.p1


Annotated TAIR IDAT5G19390.1
Annotated Gene NameRho GTPase activation protein (RhoGAP) with PH domain
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6531906-6538206 | Forward length=870
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.11224357851
Replicate 221.755650955786
Replicate 323.598999884236
Condition 2: 8 Hour
Replicate 131.740691156475
Replicate 234.621863208115
Replicate 331.330834008714
Condition 3: 24 Hour
Replicate 121.819541398378
Replicate 224.740889435433
Replicate 321.125656682708


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_19712.p1 GENE.S_Transcript_19712~~S_Transcript_19712.p1 ORF type:complete len:862 (+),score=196.15,RhoGAP|PF00620.23|1e-31,Lzipper-MIP1|PF14389.2|1.4e+04,Lzipper-MIP1|PF14389.2|1.2e+04,Lzipper-MIP1|PF14389.2|2.1e-20,PH|PF00169.25|1.5e-13 S_Transcript_19712:329-2914(+)
ATGTCGGCTTCATTGGCGGCATTTGAACGTCCCAAACTCGGTCCTTCCAATACGGTTTTTAAGAGTGGACCTCTTTTCATCTCTTCCAAAGGATTGGGTTGGAAATCTTGGAAGAAGCGTTGGTTCATTCTTACACGGACTTCTTTAGTGTTCTTCAAAAATGATCCAAGTGCCCTTCCTCAAAGAGGCGGAGAAGTAAATTTGACGTTAGGTGGGATTGACTTAAATAATTCAGGAAGCGTTGTTGTCCGAGAGGATAAAAAGCTGTTAACAGTACTTTTTCCTGATGGACGTGATGGCCGAGCATTTACGCTTAAGGCTGAGACATCAGAGGATTTATACGAATGGAAGACAGCCCTGGAGCAGGCCCTTGCACAGGCACCTAGTGCTGCCCTTGTGATGGGTCATAACGGGATATTTAGGAATGACACAAATGATGCTATCGATGGATCTTTCAATCAATGGAGGGATAAGCGTCCTGTAAAATCATTGGTGGTTGGACGTCCAATTTTGCTGGCATTGGAAGATATAGACGGTGGACCATCGTTTCTGGAGAAAGCTCTTAGATTTCTTGAGACTTATGGAACCAAAGTGGAAGGAATTTTGCGTCAGTCTGCTGATGTTGAAGAGGTGGAGCGGAGAGTCCAAGATTATGAACAAGGCAAAAATGAATTCGATCCAGATGAGGATGCTCATGTTGTTGGTGACTGTGTGAAGCATGTCCTCCGTGAGCTCCCTTCTTCTCCAGTTCCAGCATCTTGCTGTACTGCATTGCTAGATGCTTACAAAATTGAACGTAAGGAAGCTCGGATTAATGCTATGCGATCGGCAATATTGGAAACATTTCCGGAACCAAACCGGCGATTATTGCAAAGAATTTTGAAAATGATGCATACAATTGCTTCTCATTCTTCTGATAATCGGATGAGTCCATCTGCGGTTGCTGCTTGCATGGCACCTTTACTGTTGCGCCCTCTTTTAGCTGGTGAATGTGAGCTCGATGATGACTTTGAAATGAATGGTGATAATTCAGCCCAGCTTCTGGCTGCTGCAAATGCTGCCAATAATGCTCAAGCTATTATTACAACTCTTCTGGAGGAATATGAGAATATTTTTGATGATGATAGTTTGCAGAGATGCTCAATTTCTGCTGACTCGCGGATTGAGAACAGTGGGAGTGATGATTCCACAGATGATGAAAACCTAGATATCAAAGCAAATGGATGTCATGAGGCTGGTAATGAAGCAGAACAAACAGATGATGATCAGGAACGAGTGTTGAGTGGTAAACTGAGTGAAAGTAGCGGTTATGCTGGCAGTGACCTTTACGACTATAAGGTGCAGACTTTTGGAGGTGATGATTCTGATGGGTCACCTCGGACCAATCATGACTCCTCTGTCAATTCAAAACCTCGAGCAGATCCTCCAACATTTAAGGAGTCAAATACTGAGTTGAGTGAACAAACTAAAACAGTTAAAATGAGTGAAAGCTCGACTAGTGCAATGGACAGTCCTCTGACTCCAGCCGGAGAATCTTATCGCTCTATGGGGGAGATATTATCATCAATGGATCCAGGACCTCCTCTACCTGTCTCAGGTCTTGATTCAAGTGCTGAAAAGCCAACAAATAAACTCACAAATTCCAATGTTAAGCGGTCAACGTTTTGGGGCAGAAGCACTCCGCGGAAGACACCATCAATGGAATCAGTTGATTCTTCGGGAGAGGAAGAACTTGCTATCCAGAGGCTTGAAATTACGAAAAATGACTTGCGGCACCGTATTGCAAAGGAGGCACGGGGAAATGCAATATTACAAGCTAGCTTGGAGAGAAGGAAACAGGCTTTGCATGAGCGTCGCTTAGCCCTTGAACAAGATGTTCAAAGACTGCAAGAGCAGTTGCAAGCTGAAAGAGATCTTAGAGCTGCATTGGAGGTTGGTCTAAGCATGTCCTCGGGCCAATTCTCTAGTTCACGTGGTATGGATTCCAAGACAAGGGCGGAGCTTGAGGAGATTGCTCTTGCTGAGGCAGACGTAGCCAGATTGAAGCAGAAGGTGGCTGAACTGCACCATCAACTCAATCAGCAACGACTGCATCAATTTGGTCCGCTATCAGATGCATGCGAACGGAGATTTCTACAGCAAGACTTTGATAGTACTCTTGCCTTTGTTAATCATGAAAGGAAGCAAAGAAGCGAGGAGAGTTTACTGGGGCCTGAATGGAATCATATCAAAGGACAAATCTTAGCTACTGGAAGCAGCAGTAGGCAGCCTCGCAAGCAATTTATGGAGTCTACTAGTTTGAGTGATTCGAAAAATACTGATGCATCGGCTAGCGTGTCCTTGGATGAGTTTGTTGCTGTAGATTCTGCCTCAATGCCATCCACTTCTCGGGTAGCAGAGGTGCTGGATTTTCCAAGACATCCATCCGCAGCATCATCCACATTAGTGGAGTTAACAACCCGGCTCGACTTTTTCAAGGAGCGGCGATCTCAACTGATGGAGCAGCTGCACCACCTTGATCTGAATTATGGGGTGGCAACTTCGCAGGATTATTTGTACAGACCATCGTCACCTTCGTGGAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_19712.p1 GENE.S_Transcript_19712~~S_Transcript_19712.p1 ORF type:complete len:862 (+),score=196.15,RhoGAP|PF00620.23|1e-31,Lzipper-MIP1|PF14389.2|1.4e+04,Lzipper-MIP1|PF14389.2|1.2e+04,Lzipper-MIP1|PF14389.2|2.1e-20,PH|PF00169.25|1.5e-13 S_Transcript_19712:329-2914(+)
MSASLAAFERPKLGPSNTVFKSGPLFISSKGLGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETSEDLYEWKTALEQALAQAPSAALVMGHNGIFRNDTNDAIDGSFNQWRDKRPVKSLVVGRPILLALEDIDGGPSFLEKALRFLETYGTKVEGILRQSADVEEVERRVQDYEQGKNEFDPDEDAHVVGDCVKHVLRELPSSPVPASCCTALLDAYKIERKEARINAMRSAILETFPEPNRRLLQRILKMMHTIASHSSDNRMSPSAVAACMAPLLLRPLLAGECELDDDFEMNGDNSAQLLAAANAANNAQAIITTLLEEYENIFDDDSLQRCSISADSRIENSGSDDSTDDENLDIKANGCHEAGNEAEQTDDDQERVLSGKLSESSGYAGSDLYDYKVQTFGGDDSDGSPRTNHDSSVNSKPRADPPTFKESNTELSEQTKTVKMSESSTSAMDSPLTPAGESYRSMGEILSSMDPGPPLPVSGLDSSAEKPTNKLTNSNVKRSTFWGRSTPRKTPSMESVDSSGEEELAIQRLEITKNDLRHRIAKEARGNAILQASLERRKQALHERRLALEQDVQRLQEQLQAERDLRAALEVGLSMSSGQFSSSRGMDSKTRAELEEIALAEADVARLKQKVAELHHQLNQQRLHQFGPLSDACERRFLQQDFDSTLAFVNHERKQRSEESLLGPEWNHIKGQILATGSSSRQPRKQFMESTSLSDSKNTDASASVSLDEFVAVDSASMPSTSRVAEVLDFPRHPSAASSTLVELTTRLDFFKERRSQLMEQLHHLDLNYGVATSQDYLYRPSSPSWS*

Click here to download the sequence:
Link to NCBI Protein BLAST