Transcript Information: S_Transcript_197232.p1


Annotated TAIR IDAT4G33780.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: short hypocotyl in white light1 (TAIR:AT1G69935.1); Has 40 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:16202174-16203617 | Reverse length=203
E-Value4.6E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.33266251543976
Replicate 20
Replicate 30.46106840209001
Condition 2: 8 Hour
Replicate 10
Replicate 21.1185924319863
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.28329764470434
Replicate 30.31527555506395


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_197232.p1 GENE.S_Transcript_197232~~S_Transcript_197232.p1 ORF type:internal len:80 (+),score=10.75 S_Transcript_197232:3-239(+)
GATCTCTTCAACTCCTTCGTACCTTCCCCTATCTTCATGCTTCACGTCGAAGGTGACGAGCTGTTCAATGAGAGCCGAAAATGGAATCGATTCGATTTCGACAATTACGGAGATTACGACGACGATGACGATGAAGATGATGAAGAAGAAGAGGAAGAAGAAGATCGGAGTTTAGACTTGCTAGTTAGGTTTGTCCAAAATATCTTCCGAAAAATATCTAAACGAGCTCGTAAGGCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_197232.p1 GENE.S_Transcript_197232~~S_Transcript_197232.p1 ORF type:internal len:80 (+),score=10.75 S_Transcript_197232:3-239(+)
DLFNSFVPSPIFMLHVEGDELFNESRKWNRFDFDNYGDYDDDDDEDDEEEEEEEDRSLDLLVRFVQNIFRKISKRARKA

Click here to download the sequence:
Link to NCBI Protein BLAST