Transcript Information: S_Transcript_197233.p1


Annotated TAIR IDAT4G33780.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: short hypocotyl in white light1 (TAIR:AT1G69935.1); Has 40 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:16202174-16203617 | Reverse length=203
E-Value6E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.23053420104501
Condition 2: 8 Hour
Replicate 10.26656737896416
Replicate 20.55929621599317
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_197233.p1 GENE.S_Transcript_197233~~S_Transcript_197233.p1 ORF type:internal len:80 (-),score=12.43 S_Transcript_197233:1-237(-)
GATCAGGAAGGTGATGAGCTGTTCAATGAGAGCCAAAAATGGAATCGATTCGATTTCGACAATTACGGAGATTACGACGACGATGACGATGAAGATGATGAAGAAGAAGAGGAAGAAGAAGATCGGAGTTTAGACTTGCTAGTTAGGTTTGTCCAAAATATCTTCCGAAAAATATCTAAACGAGCTCGTAAGGCCGTTCGTTCCGTTCTCCCTCTCGCTATCTCCACCAAATTGGTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_197233.p1 GENE.S_Transcript_197233~~S_Transcript_197233.p1 ORF type:internal len:80 (-),score=12.43 S_Transcript_197233:1-237(-)
DQEGDELFNESQKWNRFDFDNYGDYDDDDDEDDEEEEEEEDRSLDLLVRFVQNIFRKISKRARKAVRSVLPLAISTKLV

Click here to download the sequence:
Link to NCBI Protein BLAST