Transcript Information: S_Transcript_197404.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value1E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.31258874717967
Condition 2: 8 Hour
Replicate 10.36144729351073
Replicate 20.56877581287441
Replicate 31.2644994341938
Condition 3: 24 Hour
Replicate 10.92563065638111
Replicate 20.19206619979955
Replicate 30.21374613902641


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_197404.p1 GENE.S_Transcript_197404~~S_Transcript_197404.p1 ORF type:internal len:118 (+),score=14.66,zf-RVT|PF13966.2|3.1e-12,zf-RVT|PF13966.2|3e+03 S_Transcript_197404:3-353(+)
AAGGTCCCTCTTATGGTGAGGGCTTTTTTTTGGACTTTAGCCTTGGAGAGGATTAACACCAATGATATGCGACAGCGAAGAAGGCCTTATGCTTGTCTTTCTCCGGATATTTGTTGTATGTGTAGGGAGAGTGGGGAGACTGCTTCTTATTTGTTTCTCCATTGCCCGGTTGTTCGGTTTTTGTGGGCTTCATTGTTTGGTGTGCGTGGAGAATCCCTGGTGTGTCCCTCCACCGTTTCGGAGTTCCTTCAGGTTCATTTCTTGGGGTTTGGTCGGAGTAAGAAGTTGAGTATGTTATGGCGTAATGCGGTTATTGCTATCCTGTGGTGTGTTTGGTTGGAGAGGAATGCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_197404.p1 GENE.S_Transcript_197404~~S_Transcript_197404.p1 ORF type:internal len:118 (+),score=14.66,zf-RVT|PF13966.2|3.1e-12,zf-RVT|PF13966.2|3e+03 S_Transcript_197404:3-353(+)
KVPLMVRAFFWTLALERINTNDMRQRRRPYACLSPDICCMCRESGETASYLFLHCPVVRFLWASLFGVRGESLVCPSTVSEFLQVHFLGFGRSKKLSMLWRNAVIAILWCVWLERNA

Click here to download the sequence:
Link to NCBI Protein BLAST