Transcript Information: S_Transcript_197476.p1


Annotated TAIR IDAT5G27280.1
Annotated Gene NameZim17-type zinc finger protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:9617548-9618369 | Forward length=212
E-Value1.3E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 151.421731200179
Replicate 258.335511372412
Replicate 354.781177943237
Condition 2: 8 Hour
Replicate 1152.98256697842
Replicate 2138.30731849729
Replicate 3141.89490079418
Condition 3: 24 Hour
Replicate 170.810745213155
Replicate 261.653250135657
Replicate 363.803222499383


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_197476.p1 GENE.S_Transcript_197476~~S_Transcript_197476.p1 ORF type:complete len:236 (+),score=59.12,zf-DNL|PF05180.8|2.1e-16 S_Transcript_197476:157-864(+)
ATGGATGCCCTAACATTAACAATAAGCAGCTTCCTTTCTGTAACTTCTTCATCATCATCATCATCATCTGTGACCATCAACTCTTCTTCTTCTTCCTCTTCCCTGCCCTCTCTTTCTGGTTTCTCTCCTTATAATAAAACAAAAACTCCTCTTCTTCGTTCCACAGCCAAAGGTAGAGATGACGAGTACGAAACTGAGATTGGATCATCAAATTCCAAGGAGAGGAGGATTCTTCCTCTTCCTGATAATCGCTGCCTCTCTCTTTCCCCTTTATCCAAGGATACAGCCATGGGGTTGGTTCTGAATGCAGCTGGTGGTAGAGGGTGGACAACATGTTCGGGCATGGAAGGGCCCTCTGAGCCTGCTGGGGATGCTGAATCTACTGCAGCTAAGATCTCCACTTTCCCTTGGTCTCTCTTCACCAAATCCCCTCGTCGTCGAATGTTAATTGCTTTTACCTGTAACATCTGTAACCAGCGTACTACCCGTGCCATTAATCCTCATGCTTATACTGATGGCACTGTCTTTGTTCAGTGCTGTGGTTGCAATGCCTACCACAAGCTTGTCGACAATCTCAACCTCTTTGATGGTATGAAATGTTATCTAAATTCAAGCTTCAAGTTTGGTGGTGATGGATCCGATGTCAATTTTGAATTTCGAGATGTTGACAATGGCGACGAATCCGACGATGGCTTCTTTAGCATCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_197476.p1 GENE.S_Transcript_197476~~S_Transcript_197476.p1 ORF type:complete len:236 (+),score=59.12,zf-DNL|PF05180.8|2.1e-16 S_Transcript_197476:157-864(+)
MDALTLTISSFLSVTSSSSSSSSVTINSSSSSSSLPSLSGFSPYNKTKTPLLRSTAKGRDDEYETEIGSSNSKERRILPLPDNRCLSLSPLSKDTAMGLVLNAAGGRGWTTCSGMEGPSEPAGDAESTAAKISTFPWSLFTKSPRRRMLIAFTCNICNQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFDGMKCYLNSSFKFGGDGSDVNFEFRDVDNGDESDDGFFSI*

Click here to download the sequence:
Link to NCBI Protein BLAST