Transcript Information: S_Transcript_19770.p1


Annotated TAIR IDAT4G16280.2
Annotated Gene NameRNA binding;abscisic acid binding
Annotated Gene Symbol(s)FCA
Annotation TypeOrtholog
Chromosome Positionchr4:9207164-9214412 | Reverse length=747
E-Value4.2E-191
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.071343353709
Replicate 215.721388966133
Replicate 315.902718539153
Condition 2: 8 Hour
Replicate 115.221476202409
Replicate 217.227663084245
Replicate 315.08702507131
Condition 3: 24 Hour
Replicate 118.653175962627
Replicate 217.099642267184
Replicate 316.492498497238


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_19770.p1 GENE.S_Transcript_19770~~S_Transcript_19770.p1 ORF type:complete len:835 (+),score=210.28,RRM_1|PF00076.18|2.1e-17,RRM_1|PF00076.18|2.4e-18,RRM_6|PF14259.2|2.6e-07,RRM_6|PF14259.2|6e-09,RRM_5|PF13893.2|0.00017,RRM_5|PF13893.2|3.6e-08,RRM_5|PF13893.2|1.6e+04,WW|PF00397.22|2.1e+03,WW|PF00397.22|2.2e-08 S_Transcript_19770:217-2721(+)
ATGGACAGGCACCGAGACCGTGACCGAGAAAGAGACCGTGACCGGGAACCTCGCGATCGAGATCGAGACAGAGACAGAGGTTTCGACCGAGACCGAAGTGACAGCAGATATCCCGATTTTCACCACCAGCCTCGCCGCCCTTCTCGATTTTCTGACGGTCCTCCGCCTGAACTCCGTCGTAGCCCCGGAAGATTCTCCACCGGATTCTCTGGACCCGTCGGTGGTGGTGGTGGGGGTCTTCGTGCTGCTTTCGATAGCCCTCCTCGTCACTCTCCTGCTACTGGATTCTCTGGGCCTGGCGGTGGAGGCTTCAGGCCTCCTGTTGGTGGTCCTGGTGGGCCCCCTCCTGGTGGGCATGGTGGGTTTCGGCCCATGGGAGGTGGACCTGGTGGCCCCCCCGGTGGTGGTTTTGGGAATGATTTTCAAGGCCCTCCTCCTCCTGCTCCTCCTCTTTCCGGTCAGAAACGTGGGTTACCTTTCTCGGGTCGTGGCGGTGGCGCCTCTCCAGAGCATTACGATGGAAAAAGTTTTGTCAAACTTTTTGTGGGATCCGTACCAAGAACAGCAACTGAAGAAGAAATTCGGCCATTGTTTGAAGATCAAGGAAAGGTCTTGGAGGTTGCTTTGATTAAAGACAAAAGAACAGGACAGCAGCAAGGGTGTTGTTTCATAAAATATGCTACTTCTGAAGAAGCAGATAGGGCAATTAGAGCTTTGCACAACCAATATACTTTGCCTGGGGGGGTTGTTCCAATCCAAGTTAGATATGCTGATGGTGAGCGTGAGCGACTTGGTAATGGTGCAGTTGAGTACAAGTTGTTTGTGGGCTCAATGAATAAGCTTGCTACAGAGAAGGAAGTGGAAGAGATTTTTGCACCGTATGGGCGTGTTGAAGATGTATACCTCATGCGTGATGAGAGGAAGCAGAGTAGAGGTTGTGGGTTTGTCAAGTTTGCTAATAAAGATTCAGCTATGGCAGCTATAAATGCTCTGAATGGAATATTTTTGATGAGAGGTTGTGACCAACCGTTGACTGTGCGATTTGCTGACCCTAAGAGGCCTAGGGCTGGGGAATCAAGGACTAGTCCTGCCTTTGGAGGTCCGGGTTTTGGTCCTCTTCCACCACCAGGAATCAGGGCTGCACCAGGTCCGAATTTTGCTAATTCTATGGGTGGGCGGGGACCACCAAACGCTTGGCAGCCTATGAGCCCACAGAATCTAGGTCCATCTCCTAATGCTGGTGTCCGTGGGTTTGGCAATCAATTCCCTCCTAGGCCTGGTGATGCAGGCATTTCTTCTACTGCTGGTGGTCATCTTGGTCCGCAAGGCAGCCATGCAGAAGGACCTGTCCCCGGAACATTTCCTGCCTCTTCTACGTCGCCACAGAATTATAATCAGTCTTATCAACATGCCCCTCCAAGTGGCCAGCAAATATCACCATTACAGAAGTCCGTTCCTTCACCGCAGAACTTTCCCGGTTCGTTACAACTACCTCAAGGGCCAGGATCTTATTCTCAGTCCCATAGTTCTCAGGCATCAATGAGGCTGCTTAATCAGCTTCAAACTGGTGTTCAAGCACCTTACAGCCAGCCATTTTCATCCCAGGCTCCTGGTTTGACTGGACAATTGCCTCCCGCTCAGTTTCAAGTTCAGCAGACTGCCACATCTGCAACAGCCCAGCAAACTCGTTATAGTACCAACCTGCAGCCTAATTCTACATCTTCAATGGCAAATACTCAGCTGCCTGCTCCGGCATCCCATCAACCTCCTCCTTTTCAACAATCTCCTTCTCAGTTAGCCCAAATGCTATCACAACAGACACAAACTCTCCAAGCAACTTTCCAGTCGTCCCAGCAGGCCATGTCTCAACTTCAGCAGCAGGTGCAATTGATGCAACCACAACCATCAAATCAGAACCAAACTTTTCAGCAGAACTATCAGCCTTCCAAGCAGCAGTCACAATGGGTTTGCGCTGCACCAACAACAGCTGGCAGTACTCCTGCTGTACCACCTCCTTCAGATACACCTACCACATCGGCTGCTTCTGTGGGCTCTGCAATTGCTGCCACACCAGCTCCTGTCAAATGCAATTGGACAGAGCATACTGCTCCCGATGGGCACAAATACTATTATAATAGCGTGACTAATGAAAGCAGGTGGGTGAAACCTGAGGAATTAACGTTGTATGAGCAACGACAACAGAAATTATCTGCCCAACAGCCACAAAACCAGCAGAGTTTGCAGGCTGCTCCTACTCAACAACTAACTCAATCTCAGCCACCACAGCTTCCAATGCAGTTCCGCCACACTGATCATTTGCAGCATCCTCCATTATCCTCAAATTACCAAGCTCCTAGAGGGGTAGGCAACCAAACTGCCCAGGAAGCTGCCTATCCGCAACTACAAGTTCCTCCCAACTCAATCATGGAAACTTCTCGCTTCCAACAGGGGTTTCAAGCCTGCCAGGAATGGGCATGGAAGGCTAACTCTGGAGGAGGAGCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_19770.p1 GENE.S_Transcript_19770~~S_Transcript_19770.p1 ORF type:complete len:835 (+),score=210.28,RRM_1|PF00076.18|2.1e-17,RRM_1|PF00076.18|2.4e-18,RRM_6|PF14259.2|2.6e-07,RRM_6|PF14259.2|6e-09,RRM_5|PF13893.2|0.00017,RRM_5|PF13893.2|3.6e-08,RRM_5|PF13893.2|1.6e+04,WW|PF00397.22|2.1e+03,WW|PF00397.22|2.2e-08 S_Transcript_19770:217-2721(+)
MDRHRDRDRERDRDREPRDRDRDRDRGFDRDRSDSRYPDFHHQPRRPSRFSDGPPPELRRSPGRFSTGFSGPVGGGGGGLRAAFDSPPRHSPATGFSGPGGGGFRPPVGGPGGPPPGGHGGFRPMGGGPGGPPGGGFGNDFQGPPPPAPPLSGQKRGLPFSGRGGGASPEHYDGKSFVKLFVGSVPRTATEEEIRPLFEDQGKVLEVALIKDKRTGQQQGCCFIKYATSEEADRAIRALHNQYTLPGGVVPIQVRYADGERERLGNGAVEYKLFVGSMNKLATEKEVEEIFAPYGRVEDVYLMRDERKQSRGCGFVKFANKDSAMAAINALNGIFLMRGCDQPLTVRFADPKRPRAGESRTSPAFGGPGFGPLPPPGIRAAPGPNFANSMGGRGPPNAWQPMSPQNLGPSPNAGVRGFGNQFPPRPGDAGISSTAGGHLGPQGSHAEGPVPGTFPASSTSPQNYNQSYQHAPPSGQQISPLQKSVPSPQNFPGSLQLPQGPGSYSQSHSSQASMRLLNQLQTGVQAPYSQPFSSQAPGLTGQLPPAQFQVQQTATSATAQQTRYSTNLQPNSTSSMANTQLPAPASHQPPPFQQSPSQLAQMLSQQTQTLQATFQSSQQAMSQLQQQVQLMQPQPSNQNQTFQQNYQPSKQQSQWVCAAPTTAGSTPAVPPPSDTPTTSAASVGSAIAATPAPVKCNWTEHTAPDGHKYYYNSVTNESRWVKPEELTLYEQRQQKLSAQQPQNQQSLQAAPTQQLTQSQPPQLPMQFRHTDHLQHPPLSSNYQAPRGVGNQTAQEAAYPQLQVPPNSIMETSRFQQGFQACQEWAWKANSGGGA*

Click here to download the sequence:
Link to NCBI Protein BLAST