Transcript Information: S_Transcript_19785.p1


Annotated TAIR IDAT5G11170.1
Annotated Gene NameDEAD/DEAH box RNA helicase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3553334-3556646 | Forward length=427
E-Value1E-123
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1117.57385620319
Replicate 2104.60616143439
Replicate 3103.86655346585
Condition 2: 8 Hour
Replicate 1130.71085010302
Replicate 2124.77035982653
Replicate 3128.10718361601
Condition 3: 24 Hour
Replicate 183.032293466736
Replicate 290.768001586864
Replicate 382.818653270531


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_19785.p1 GENE.S_Transcript_19785~~S_Transcript_19785.p1 ORF type:5prime_partial len:201 (+),score=45.18,Helicase_C|PF00271.27|2.1e-29 S_Transcript_19785:2-604(+)
TTCCTTTCGATTGAGGAAGGCCCTAATATGCTTTACTGTGACATTTCTTCCTTTCAGCCGATGGAAATATATGTTGACGACGAGGCCAAGTTGACCCTTCATGGTCTTGTACAGCACTACATCAAGTTGACCGAGTTGGAGAAAAATCGCAAGTTGAACGACCTTTTGGATGCTCTAGATTTCAATCAGGTGGTTATCTTTGTCAAGAGTGTCAGCCGAGCTGCTGAGCTGAACAAGCTACTGGTTGAGTGCAACTTCCCATCGATCTGCATCCACTCTGGCATGTCCCAGGAAGAGAGGCTGGCTCGCTACAAGGGATTTAAGGATGGAAAGCAAAGAATCCTTGTTGCAACAGATTTAGTCGGTAGAGGAATTGACATTGAAAGAGTGAACATTGTTATTAATTACGACATGCCTGACTCTGCAGACACTTACTTGCATAGGGTTGGTAGAGCTGGGAGGTTTGGCACCAAGGGTCTTGCTATTACATTTGTGTCTTCTGCATCAGACTCCGATGTTCTTAATCAGGTCCAGGAAAGGTTTGAGGTGGATATTAAAGAACTTCCTGAGCAAATCGACACCTCTACATACATGCCATCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_19785.p1 GENE.S_Transcript_19785~~S_Transcript_19785.p1 ORF type:5prime_partial len:201 (+),score=45.18,Helicase_C|PF00271.27|2.1e-29 S_Transcript_19785:2-604(+)
FLSIEEGPNMLYCDISSFQPMEIYVDDEAKLTLHGLVQHYIKLTELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLARYKGFKDGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQIDTSTYMPS*

Click here to download the sequence:
Link to NCBI Protein BLAST