Transcript Information: S_Transcript_197894.p1


Annotated TAIR IDAT3G16890.1
Annotated Gene Namepentatricopeptide (PPR) domain protein 40
Annotated Gene Symbol(s)PPR40
Annotation TypeHomolog
Chromosome Positionchr3:5768401-5770380 | Reverse length=659
E-Value3E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0395703607492
Replicate 20.34473108683617
Replicate 30.43225162695939
Condition 2: 8 Hour
Replicate 10.66641844741041
Replicate 20.52434020249359
Replicate 30.49959017824175
Condition 3: 24 Hour
Replicate 11.3653052181621
Replicate 21.0623661676413
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_197894.p1 GENE.S_Transcript_197894~~S_Transcript_197894.p1 ORF type:3prime_partial len:128 (+),score=10.38 S_Transcript_197894:116-496(+)
ATGAGAGGGTTCTCAACATCAGCATCTAGGGCTTTTCCTGCTTTCAAAAACCTCCCTAATGGCCCCAAACCTACCACCAAACACCCTCTAAAACTCCAACAAAATACGCACCAGAGTGAAGCTCACAAGGTCAAAGGTAAGTCACCATCAAACCCTCACTTCAAATATTCAAACTTAACTTCCACCTTCAAATACCCTGCGACTCAAAAGATTTCCCAGAATTCAATTGATCATAACTCTCTTTCTCAAATTCTGCTTAGAAAGGACTGGCATTTGTTGCTTAATCACGAGTTAAAAGCTGGTAGGGTTGTTCTGAACCCGCAATCTATAGTGAGTATTTTGCAAAACCAAGAAAACCCATTACATACTATTAGATTTTAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_197894.p1 GENE.S_Transcript_197894~~S_Transcript_197894.p1 ORF type:3prime_partial len:128 (+),score=10.38 S_Transcript_197894:116-496(+)
MRGFSTSASRAFPAFKNLPNGPKPTTKHPLKLQQNTHQSEAHKVKGKSPSNPHFKYSNLTSTFKYPATQKISQNSIDHNSLSQILLRKDWHLLLNHELKAGRVVLNPQSIVSILQNQENPLHTIRFY

Click here to download the sequence:
Link to NCBI Protein BLAST