Transcript Information: S_Transcript_197895.p1


Annotated TAIR IDAT3G16890.1
Annotated Gene Namepentatricopeptide (PPR) domain protein 40
Annotated Gene Symbol(s)PPR40
Annotation TypeHomolog
Chromosome Positionchr3:5768401-5770380 | Reverse length=659
E-Value2E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.47523216491394
Replicate 20.6566306415927
Replicate 30.8782255277905
Condition 2: 8 Hour
Replicate 10.63468423562896
Replicate 21.3316576571266
Replicate 30.25376009053549
Condition 3: 24 Hour
Replicate 11.3002906839639
Replicate 20.1349036403354
Replicate 30.60052486678848


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_197895.p1 GENE.S_Transcript_197895~~S_Transcript_197895.p1 ORF type:internal len:168 (+),score=15.93 S_Transcript_197895:3-503(+)
GGTCCAGAAAATCGGATTCTCAGAAAATGTAGAGACTGTAGAGTGGAGCAATATAGTTTGGGGTTCTGGGGCGAACAATCTGCACTAGCTACCGCTCTGCGCTCTCCCTACCGGAGGGACATGAGAGGGTTCTCAACATCAGCATCTAGGGCCTTTGCTGCTTTCAAAAACGTCCCTAATGGCTCCAAACCCACCACCAAACACCCTGTAAAAGTCCCACAAAATACGCACCAGAATGAAGCTCACAAGGTCAAAGGTAAGTCACCATCAAACCCTCATTTCAAATATTCAAACTTTACTTCCACCTTCAAATACCCTGCAACTCAAAAGATTTCCCAGAATTCAATTGATCATAACTCTCTTTCTCAAATTCTGCTTAGAAAGGACTGGCATTTGTTGCTTAATCACGAGTTAAAAGCTGGTAGGGTTGTTCTGAACCCGCAATCTATAGTGAGTATTTTGCAAAACCAAGAAAACCCATTACATACTATTAGATTTTAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_197895.p1 GENE.S_Transcript_197895~~S_Transcript_197895.p1 ORF type:internal len:168 (+),score=15.93 S_Transcript_197895:3-503(+)
GPENRILRKCRDCRVEQYSLGFWGEQSALATALRSPYRRDMRGFSTSASRAFAAFKNVPNGSKPTTKHPVKVPQNTHQNEAHKVKGKSPSNPHFKYSNFTSTFKYPATQKISQNSIDHNSLSQILLRKDWHLLLNHELKAGRVVLNPQSIVSILQNQENPLHTIRFY

Click here to download the sequence:
Link to NCBI Protein BLAST