Transcript Information: S_Transcript_197898.p1


Annotated TAIR IDAT5G66360.2
Annotated Gene NameRibosomal RNA adenine dimethylase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26510329-26511711 | Forward length=380
E-Value3.9E-135
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.55156479243897
Replicate 20.17147245770089
Replicate 30.28667465414923
Condition 2: 8 Hour
Replicate 10.49722412656528
Replicate 20.9273305135638
Replicate 30.77311364370399
Condition 3: 24 Hour
Replicate 10.1697788872326
Replicate 20
Replicate 30.32671041975539


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_197898.p1 GENE.S_Transcript_197898~~S_Transcript_197898.p1 ORF type:complete len:386 (+),score=77.48,RrnaAD|PF00398.16|2.2e-60,Methyltransf_18|PF12847.3|4.7e-10,Methyltransf_31|PF13847.2|3.8e-09,Methyltransf_26|PF13659.2|1.6e-07,Methyltransf_11|PF08241.8|1.4e-06,UPF0020|PF01170.14|4.2e-06,Methyltransf_25|PF13649.2|6e-06,MTS|PF05175.10|5.7e-06 S_Transcript_197898:297-1454(+)
ATGCTTCAACCATCCAAGTTTCTACTGTTTACTCCCTCCATATTGGTTTTACAATGTCAACACTTGCTGCCACACCTCAACTGCAATCTTTATCACCATTATGCCTCCGATGATGACGATGCTAATAAGTTTAGTAACACCCGAGAAAGAGAAAGTGGCCAGTGTCACTTCCAACTCTATAAAAGCAGGGGTCAACATCTTCTTACTAATGCACGAGTTCTCGACTCCATTGTCAAGTCATCTAACATCAAGGCTACTGATACTGTTCTAGAGATTGGCCCTGGTACTGGAAACCTCACTCTTCGGCTCTTAGAAGCTGCCCATAAGGTTGTTGCTGTTGAAATAGATTGGAGGATGGTTGAAACACTCCAAAAGCGAGTTGCTGAACATGGACATGACGACAATTTAACTATAATATGTAAAGACGCATTGAAGACTGAGCTCCCTGAATTTGATCTTGTTGTGGCAAATATTCCGTACGGGATTTCTTCACCTCTTATTGCTAAATTGGTGTTTGGGACATCCTCATTTAGAAGTGCTACTCTTTTGCTCCAGAAAGAGTTTGCACGTCGCTTGCTAGCTAATCCGGGTGATTCAGAGTTCAATCGCTTGGCTGTGAATGTCAAGCTGGTTGCTGAAGTCGAGCATGTTATGGATGTAAGCAAAAGGGACTTTTTTCCTGTTCCAAAAGTCGACTCGTCTGTGGTTGTGATCAGACCAAAATCAGAAAGTCCTAATGTAGATCTCTATGAATGGTGTGCATTTACAAGGACATGCTTTAGTAAGAAAAACAAGACATTAGGTGCAACATTCAAGCAAAAGAAAAAGTTGATTGAGCTGATGAGACTATCTAATTTGATGGAATTGAACCAAGAATACTTGGTGGTTGGTCATGTCTCTGATGCGAGTGAAAAGTACAAAGATGCAAAGGATGGTGGCAGCATTCATAGTTTTACTTGTGCAGAAGCAGACATGGCTTTGTTCAAAGACAAATTAATCGAAATCCTAAGGTCAAGTGGGTTTGAGAACAAGAGGCCTTCAAAGATATCTATTGAGGAACTACTGCACTTGCTTTTCATGTTCAACCAGAATAGGATATTTTTTCATAACAAAAAAGATGCTACAAATACAGAACTGGCTGCTTCCTTTGCTCTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_197898.p1 GENE.S_Transcript_197898~~S_Transcript_197898.p1 ORF type:complete len:386 (+),score=77.48,RrnaAD|PF00398.16|2.2e-60,Methyltransf_18|PF12847.3|4.7e-10,Methyltransf_31|PF13847.2|3.8e-09,Methyltransf_26|PF13659.2|1.6e-07,Methyltransf_11|PF08241.8|1.4e-06,UPF0020|PF01170.14|4.2e-06,Methyltransf_25|PF13649.2|6e-06,MTS|PF05175.10|5.7e-06 S_Transcript_197898:297-1454(+)
MLQPSKFLLFTPSILVLQCQHLLPHLNCNLYHHYASDDDDANKFSNTRERESGQCHFQLYKSRGQHLLTNARVLDSIVKSSNIKATDTVLEIGPGTGNLTLRLLEAAHKVVAVEIDWRMVETLQKRVAEHGHDDNLTIICKDALKTELPEFDLVVANIPYGISSPLIAKLVFGTSSFRSATLLLQKEFARRLLANPGDSEFNRLAVNVKLVAEVEHVMDVSKRDFFPVPKVDSSVVVIRPKSESPNVDLYEWCAFTRTCFSKKNKTLGATFKQKKKLIELMRLSNLMELNQEYLVVGHVSDASEKYKDAKDGGSIHSFTCAEADMALFKDKLIEILRSSGFENKRPSKISIEELLHLLFMFNQNRIFFHNKKDATNTELAASFAL*

Click here to download the sequence:
Link to NCBI Protein BLAST