Transcript Information: S_Transcript_197903.p1


Annotated TAIR IDAT5G66360.2
Annotated Gene NameRibosomal RNA adenine dimethylase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:26510329-26511711 | Forward length=380
E-Value2E-93
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.15983784525634
Replicate 20.19876386988752
Replicate 30.055383591842644
Condition 2: 8 Hour
Replicate 10.64040211162562
Replicate 21.0749236583652
Replicate 30.83215020680107
Condition 3: 24 Hour
Replicate 10
Replicate 20.2041784826698
Replicate 30.075741875090439


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_197903.p1 GENE.S_Transcript_197903~~S_Transcript_197903.p1 ORF type:complete len:333 (+),score=59.75,RrnaAD|PF00398.16|3.8e-61,Methyltransf_18|PF12847.3|2.1e-10,Methyltransf_31|PF13847.2|3.8e-09,Methyltransf_26|PF13659.2|8.5e-09,Methyltransf_11|PF08241.8|8.7e-07,Methyltransf_25|PF13649.2|1.3e-05,Methyltransf_12|PF08242.8|1.8e-05,Methyltransf_4|PF02390.13|1.9e-05 S_Transcript_197903:302-1300(+)
ATGCTTCAACCAACCAAGTTCCTACTGTTTACTCCCTCTATATTGGTTCTACAATGTCAACACTTGCTTCCACACCTCAACCGCAATCTTTATCACCACTATGCCTCCGATGATGACGGTGCTAATAAGTTTAGTAACACCCGAGAAAGAGAAAGTGGTCAGCGTCACTTCCAACTCTACAAAAGCAGGGGTCAACATTTTCTTACTAATGTACGAGTTCTCGACTCCATTGTCAAGTCATCTAACATCAAGGCTACTGATACTGTTCTAGAGATTGGCCCTGGTACTGGAAACCTCACTCTTCGGCTCTTAGAAGCTGCCCATAAGGTTGTTGCTGTTGAAATAGATCGGAGGATGGTTGAAACACTTCATAAGCGAGTTTCTGAACATGGAGACGACGACAATTTAACTATAATATGTAAAGACGCATTGAAGACTGAGCTCCCTGAATTTGATCTTGTTGTGGCCAATATTCCGTACGGAATTTCTTCACTTCTTATTGCTAAATTGGTGTTTGGGACATCCTCATTTAGAAGTGCTACTCTTTTGCTCCAGAAAGAGTTTGCACGTCGCTTGCTAGCTAATCCGGGTGATTCAGAGTTCAATCGCTTGGCTGTGAATGTCAAGCTGGTTGCTGAAGTCGAGCATGTTATGGATGTAAGCAAAAGGGACTTTTTTCCTGTTCCAAAAGTCGACTCGTCTGTGGTTGTGATCAGACCAAAATTAGAAATTCCCAATGTAGATCTTTATGAATGGTGTGCATTTACAAGGACATGCTTTAGTAAGAAAAACAAGACATTAGGTGCAACATTCAAGCAAAAGAAAAAGTTGATTGAGCTGATGAGACTATCTAATTTGATGGAATTGAACCAAGAAAACTTGGTGGTTGGTCATGTGTCTGATGCGAGTGATAAGTACAATGATGCAAAGGATGGTGGCAGCATTCATAGTTTTACTTGTGCAGAAACAGATATGGCTTTGTTCAAAGATATCTATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_197903.p1 GENE.S_Transcript_197903~~S_Transcript_197903.p1 ORF type:complete len:333 (+),score=59.75,RrnaAD|PF00398.16|3.8e-61,Methyltransf_18|PF12847.3|2.1e-10,Methyltransf_31|PF13847.2|3.8e-09,Methyltransf_26|PF13659.2|8.5e-09,Methyltransf_11|PF08241.8|8.7e-07,Methyltransf_25|PF13649.2|1.3e-05,Methyltransf_12|PF08242.8|1.8e-05,Methyltransf_4|PF02390.13|1.9e-05 S_Transcript_197903:302-1300(+)
MLQPTKFLLFTPSILVLQCQHLLPHLNRNLYHHYASDDDGANKFSNTRERESGQRHFQLYKSRGQHFLTNVRVLDSIVKSSNIKATDTVLEIGPGTGNLTLRLLEAAHKVVAVEIDRRMVETLHKRVSEHGDDDNLTIICKDALKTELPEFDLVVANIPYGISSLLIAKLVFGTSSFRSATLLLQKEFARRLLANPGDSEFNRLAVNVKLVAEVEHVMDVSKRDFFPVPKVDSSVVVIRPKLEIPNVDLYEWCAFTRTCFSKKNKTLGATFKQKKKLIELMRLSNLMELNQENLVVGHVSDASDKYNDAKDGGSIHSFTCAETDMALFKDIY*

Click here to download the sequence:
Link to NCBI Protein BLAST