Transcript Information: S_Transcript_198101.p2


Annotated TAIR IDAT5G55660.1
Annotated Gene NameDEK domain-containing chromatin associated protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:22539375-22543142 | Forward length=778
E-Value5E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.1418126458199
Replicate 23.5239177765475
Replicate 32.0491928981778
Condition 2: 8 Hour
Replicate 15.4794405675967
Replicate 23.7286414399544
Replicate 33.1085611090598
Condition 3: 24 Hour
Replicate 14.0959156544864
Replicate 22.5182012862608
Replicate 35.7800518428391


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_198101.p2 GENE.S_Transcript_198101~~S_Transcript_198101.p2 ORF type:5prime_partial len:144 (+),score=27.92,DEK_C|PF08766.7|7.1e-06 S_Transcript_198101:1-432(+)
GCTGTCAGAGGAAAGGAGAAATCTAGTACTGTAACTAAAGGAACTCCAAAAAAATCACCCTCTAGCCGCTCCAAGGTTGCTGGGGGCAATGATACGACTCCTAAGGTGTTCTCAAGGAAGAAGAAAATTGAAGAACCTAAAAAAGAAAAGACTTCAGCTTCAAAAAAACCGGCTACAAAGGAAAAGGCTGGCAAAAAGGCTGTCAGAGGGAAGGAGAAATTAAAAGAAGATAAATTGAAGCCAAGTGATGATGAACTAAGAAGCGCAATATGTGGCATTCTAAAAGAAGTTGACTTCAATACGGCAACCTTCACCGACATTCTGAAGCAACTTGGTAAGTTCCCATTTGCTCTTTCCTTTAATTCGAACTCTGTAAGATCGGAAATTAATGGATGTTGGTTATTAAAAGCTAGCGACCTCATTGCTTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_198101.p2 GENE.S_Transcript_198101~~S_Transcript_198101.p2 ORF type:5prime_partial len:144 (+),score=27.92,DEK_C|PF08766.7|7.1e-06 S_Transcript_198101:1-432(+)
AVRGKEKSSTVTKGTPKKSPSSRSKVAGGNDTTPKVFSRKKKIEEPKKEKTSASKKPATKEKAGKKAVRGKEKLKEDKLKPSDDELRSAICGILKEVDFNTATFTDILKQLGKFPFALSFNSNSVRSEINGCWLLKASDLIAF*

Click here to download the sequence:
Link to NCBI Protein BLAST