Transcript Information: S_Transcript_198122.p1


Annotated TAIR IDAT1G02070.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G60520.1); Has 98 Blast hits to 98 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:370445-370947 | Reverse length=131
E-Value2.3E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.4342385331063
Replicate 28.0546692035372
Replicate 34.1959664105546
Condition 2: 8 Hour
Replicate 12.7079860720169
Replicate 22.3673913904473
Replicate 31.2406048870624
Condition 3: 24 Hour
Replicate 18.5530231656295
Replicate 29.2334047162897
Replicate 39.6083978686157


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_198122.p1 GENE.S_Transcript_198122~~S_Transcript_198122.p1 ORF type:5prime_partial len:189 (+),score=23.81 S_Transcript_198122:2-568(+)
TCATCCCATTTTCCTTCCCTTTCCTTTTCTCCAAAAAAAAAAAAAAACTCTCTCTCTCTCTCTAACTTTCTGTCTCCCTTTTCTCTCTCTAAAAAGAAAGAAATAAAAATGGTGGATCAAGAAAGAGTATGCTGTTTGTGTGGCGATGTGGGGTTCGCTGACAAGCTCTTCCGTTGTGCCCGTTGCCGCTTTCGCTTCCAACACTCGTATTGTAGCAACTACTACAGTGGAAGTGAATTATCATCATCAACAACAACAACAATAACAGCATCAACAAAGGAGATATGTGACTGGTGCCAAAGTGAAGGAAGAAACTCATCATCTTCTTCAAACAGCAGGTCATCATCTAGGAGAGATCATATGATCCGCTCTCAATACCATTCAGGTGATAGAATCAAACAATTTGACATTCATCATCATCATAATAATCAAGATTCATCATCTTCCGGTGGTGGGGATCACCAGAAACCATCAAACACCAACGTCGCCACCAGGAACTCCGGCGTACCGTCTCCTCGGACCGGCTCTCATCGTCGTTACAAGCTTCTTAAGGATGTCATGTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_198122.p1 GENE.S_Transcript_198122~~S_Transcript_198122.p1 ORF type:5prime_partial len:189 (+),score=23.81 S_Transcript_198122:2-568(+)
SSHFPSLSFSPKKKKNSLSLSNFLSPFSLSKKKEIKMVDQERVCCLCGDVGFADKLFRCARCRFRFQHSYCSNYYSGSELSSSTTTTITASTKEICDWCQSEGRNSSSSSNSRSSSRRDHMIRSQYHSGDRIKQFDIHHHHNNQDSSSSGGGDHQKPSNTNVATRNSGVPSPRTGSHRRYKLLKDVMC*

Click here to download the sequence:
Link to NCBI Protein BLAST