Transcript Information: S_Transcript_198251.p1


Annotated TAIR IDAT4G33170.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:15995701-15998673 | Reverse length=990
E-Value3E-87
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.5985623115179
Replicate 20.45805099427366
Replicate 30.35098632685053
Condition 2: 8 Hour
Replicate 10.62721736226862
Replicate 20.77411240967912
Replicate 31.2907520176027
Condition 3: 24 Hour
Replicate 10.15117566429477
Replicate 20.54895045340634
Replicate 30.69818808041844


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_198251.p1 GENE.S_Transcript_198251~~S_Transcript_198251.p1 ORF type:3prime_partial len:578 (+),score=67.08,PPR|PF01535.16|45,PPR|PF01535.16|0.17,PPR|PF01535.16|7,PPR|PF01535.16|1.5,PPR|PF01535.16|67,PPR|PF01535.16|0.49,PPR|PF01535.16|2.1e-06,PPR|PF01535.16|4.2e-06,PPR|PF01535.16|8e-08,PPR|PF01535.16|1.2,PPR|PF01535.16|0.076,PPR|PF01535.16|4.3e+03,PPR_2|PF13041.2|2.6e+02,PPR_2|PF13041.2|0.65,PPR_2|PF13041.2|7.1,PPR_2|PF13041.2|0.00053,PPR_2|PF13041.2|7.8,PPR_2|PF13041.2|1.3e-08,PPR_2|PF13041.2|0.00021,PPR_2|PF13041.2|1.8e-09,PPR_2|PF13041.2|0.1,PPR_2|PF13041.2|16,PPR_3|PF13812.2|3,PPR_3|PF13812.2|3.9e+03,PPR_3|PF13812.2|1.2e+03,PPR_3|PF13812.2|33,PPR_3|PF13812.2|42,PPR_3|PF13812.2|0.0021,PPR_3|PF13812.2|0.013,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|0.075,PPR_3|PF13812.2|1.1,PPR_1|PF12854.3|4.9e+02,PPR_1|PF12854.3|16,PPR_1|PF12854.3|6.3e+02,PPR_1|PF12854.3|20,PPR_1|PF12854.3|15,PPR_1|PF12854.3|23,PPR_1|PF12854.3|0.021,PPR_1|PF12854.3|1e-06,PPR_1|PF12854.3|2.9e+03,PPR_1|PF12854.3|0.4 S_Transcript_198251:197-1927(+)
ATGTTCTCTCCAAAATCATTTTACTTCCAAGCCAGGAGGGCCCAACACCTTTTCTCATACTCACCATTGATCTTCTTCACAACCACCTCAAAGCGCACCAACAAACTCACCTTCGAAATACCAGACACACAAAAAGCCTACTCCTACTTTCTCAAAAATGCCCAGAAAACCTCTGATTTGCCTTATGGGCAAGCAGCCCATACCCAACTCATTAAAAACAATTGCATATCTTTCCCTTTCCTCCAGAATTTCCTCCTTACTACGTACCTTAAATGTGGGGACTTTTTTTTGAACTTAAATGTGGACTTATATAGTGCACTCCTTCTGTTCGATGAAATGCCTGAAAGAAATGTTGTTTCTTGGTCTTCCCTTATTGCTGGCGTTGTCCGACTTGGCTATCCTCAACATGGTCTCTGGTACTTCTCCTGTATGTACGGTGTTGATATCAGGCCTATGGAATATACGCTAGTTAGTGCATTCAATGCTTGCTCCATCTCTGGTACTTTGGCTCCTCAAGGTTATCAACTTTATGCATTAGTTGTTCAATTGGGATTTGAATGGAATGTTACAGTTATCAATGTATTTTTGACGGCTTTGATAAGGAATGGATGTTTTAGGGATGCCGTAAGGGCTTTTGACGAGTGCACGGTTAAAGATACAGTGTCTTGGAATGCCATGATTGCTGGGTATTCGCAAATTTCACCATTCGAAATCCCACATTTCTGGTTGAGGATGATCTTTGAAGGTGTAAAACCAGATGGGTTTATATTTTCCGCTGTTCTAAATGGCTTAGCTAATCTTGGGGACCGTAAATTGGGAATGCAGGTCCATGGGCAGCTCGTGAAGAGTGGCCATGGGAGTGAAACATGTGTTGCGAATTCCGTACTTGATATGTATGTGAAGTTTGGGGATTCAGTTGAGGGGTTTAAAGCTTTTGATGAGATCAGTTACAAGAATGTTGTATCTTGGACAACAATGGCAACCGGATGTGTGCATTGGAGGTTGCCTAACAAAGCAATTGAACTTTTTGGAGAAATGAAGATGAAGGGGATCAGACCAAATAAATTTAGTCTAGCTACCAACTTTAATGCCTGCGCTAATATGGCTAATCTGGATGAAGGGAAGAAAGCTCATGCTTTGAGGATAAAGCTCAAGTCGAGTGAAGTTGATGTATGTATCGACAATGCTCTACTTGATATGTATGCCAAATGTGGATGTATGGAGGATGCAATGAAGGTGTTTAGGAGAATGAAGGAGCACACAATTGTGACATGGACAACTATGGTGATGGGATTTGCTCAAAGCGGCCAAGTAACAGATGCTCTTGAAATTTTTGATGAAATGGTAGCTCAAGGCACTAATAAGCCCAACTATGTAACTTTCGTGTGTGTGCTTTACGCTTGTAGCCAAGGAGGGTTTGTCGAGGAGGGCTGGAAGCATTTCTCCTCAATGACTCAACAGTATGGAATTTCACCAGGAGAAGATCACTATGTTTGTATGGTCGATCTCCTTGGACGAACTGGACGCATAAAGGAAGCAGAGGAACTCATCTCAACAATGCCATTCAAACCAGGGCCGCTAATTTGGCAGACCTTACTTGGCGCCTGTCACATTCATGGGGATATTGAAGCAGGAAAGCGAGCAGCGGAGAAGGCAATGCATCTTAGTCGGAGTTACCCGTCCACTTACGTACTCTTATCCAACATGTTTGCTGGTTTGAGTCAGTGGGAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_198251.p1 GENE.S_Transcript_198251~~S_Transcript_198251.p1 ORF type:3prime_partial len:578 (+),score=67.08,PPR|PF01535.16|45,PPR|PF01535.16|0.17,PPR|PF01535.16|7,PPR|PF01535.16|1.5,PPR|PF01535.16|67,PPR|PF01535.16|0.49,PPR|PF01535.16|2.1e-06,PPR|PF01535.16|4.2e-06,PPR|PF01535.16|8e-08,PPR|PF01535.16|1.2,PPR|PF01535.16|0.076,PPR|PF01535.16|4.3e+03,PPR_2|PF13041.2|2.6e+02,PPR_2|PF13041.2|0.65,PPR_2|PF13041.2|7.1,PPR_2|PF13041.2|0.00053,PPR_2|PF13041.2|7.8,PPR_2|PF13041.2|1.3e-08,PPR_2|PF13041.2|0.00021,PPR_2|PF13041.2|1.8e-09,PPR_2|PF13041.2|0.1,PPR_2|PF13041.2|16,PPR_3|PF13812.2|3,PPR_3|PF13812.2|3.9e+03,PPR_3|PF13812.2|1.2e+03,PPR_3|PF13812.2|33,PPR_3|PF13812.2|42,PPR_3|PF13812.2|0.0021,PPR_3|PF13812.2|0.013,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|0.075,PPR_3|PF13812.2|1.1,PPR_1|PF12854.3|4.9e+02,PPR_1|PF12854.3|16,PPR_1|PF12854.3|6.3e+02,PPR_1|PF12854.3|20,PPR_1|PF12854.3|15,PPR_1|PF12854.3|23,PPR_1|PF12854.3|0.021,PPR_1|PF12854.3|1e-06,PPR_1|PF12854.3|2.9e+03,PPR_1|PF12854.3|0.4 S_Transcript_198251:197-1927(+)
MFSPKSFYFQARRAQHLFSYSPLIFFTTTSKRTNKLTFEIPDTQKAYSYFLKNAQKTSDLPYGQAAHTQLIKNNCISFPFLQNFLLTTYLKCGDFFLNLNVDLYSALLLFDEMPERNVVSWSSLIAGVVRLGYPQHGLWYFSCMYGVDIRPMEYTLVSAFNACSISGTLAPQGYQLYALVVQLGFEWNVTVINVFLTALIRNGCFRDAVRAFDECTVKDTVSWNAMIAGYSQISPFEIPHFWLRMIFEGVKPDGFIFSAVLNGLANLGDRKLGMQVHGQLVKSGHGSETCVANSVLDMYVKFGDSVEGFKAFDEISYKNVVSWTTMATGCVHWRLPNKAIELFGEMKMKGIRPNKFSLATNFNACANMANLDEGKKAHALRIKLKSSEVDVCIDNALLDMYAKCGCMEDAMKVFRRMKEHTIVTWTTMVMGFAQSGQVTDALEIFDEMVAQGTNKPNYVTFVCVLYACSQGGFVEEGWKHFSSMTQQYGISPGEDHYVCMVDLLGRTGRIKEAEELISTMPFKPGPLIWQTLLGACHIHGDIEAGKRAAEKAMHLSRSYPSTYVLLSNMFAGLSQWE

Click here to download the sequence:
Link to NCBI Protein BLAST