Transcript Information: S_Transcript_198253.p1


Annotated TAIR IDAT5G16860.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5543834-5546386 | Forward length=850
E-Value1E-83
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.86033409165454
Replicate 20.61813850053382
Replicate 30.39747276042243
Condition 2: 8 Hour
Replicate 10.68939839387283
Replicate 21.0607342027457
Replicate 30.6890899010231
Condition 3: 24 Hour
Replicate 10.32955643197017
Replicate 20
Replicate 30.54357854321371


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_198253.p1 GENE.S_Transcript_198253~~S_Transcript_198253.p1 ORF type:complete len:464 (+),score=63.01,PPR|PF01535.16|5.4,PPR|PF01535.16|1.1,PPR|PF01535.16|51,PPR|PF01535.16|0.38,PPR|PF01535.16|1.6e-06,PPR|PF01535.16|3.2e-06,PPR|PF01535.16|6.1e-08,PPR|PF01535.16|0.91,PPR|PF01535.16|0.058,PPR|PF01535.16|3.4e+03,PPR|PF01535.16|1.7e+02,PPR_2|PF13041.2|5.4,PPR_2|PF13041.2|0.0004,PPR_2|PF13041.2|6,PPR_2|PF13041.2|1e-08,PPR_2|PF13041.2|0.00016,PPR_2|PF13041.2|1.3e-09,PPR_2|PF13041.2|0.09,PPR_2|PF13041.2|12,PPR_2|PF13041.2|7.1e+03,PPR_3|PF13812.2|3e+03,PPR_3|PF13812.2|9.2e+02,PPR_3|PF13812.2|25,PPR_3|PF13812.2|32,PPR_3|PF13812.2|0.0016,PPR_3|PF13812.2|0.01,PPR_3|PF13812.2|0.0086,PPR_3|PF13812.2|0.057,PPR_3|PF13812.2|0.87,PPR_3|PF13812.2|1.3e+03,PPR_1|PF12854.3|4.9e+02,PPR_1|PF12854.3|16,PPR_1|PF12854.3|12,PPR_1|PF12854.3|18,PPR_1|PF12854.3|0.016,PPR_1|PF12854.3|7.7e-07,PPR_1|PF12854.3|2.2e+03,PPR_1|PF12854.3|0.3 S_Transcript_198253:596-1987(+)
ATGTACGGTGTTGATATCAGGCCTATGGAATATACGCTAGTTAGTGCATTCAATGCTTGCTCCATCTCTGGTACTTTGGCTCCTCAAGGTTATCAACTTTATGCATTAGTTGTTCAATTGGGATTTGAATGGAATGTTACAGTTATCAATGTATTTTTGACGGCTTTGATAAGGAATGGATGTTTTAGGGATGCCGTAAGGGCTTTTGACGAGTGCACGGTTAAAGATACAGTGTCTTGGAATGCCATGATTGCTGGGTATTCGCAAATTTCACCATTCGAAATCCCACATTTCTGGTTGAGGATGATCTTTGAAGGTGTAAAACCAGATGGGTTTATATTTTCCGCTGTTCTAAATGGCTTAGCTAATCTTGGGGACCGTAAATTGGGAATGCAGGTCCATGGGCAGCTCGTGAAGAGTGGCCATGGGAGTGAAACATGTGTTGCGAATTCCGTACTTGATATGTATGTGAAGTTTGGGGATTCAGTTGAGGGGTTTAAAGCTTTTGATGAGATCAGTTACAAGAATGTTGTATCTTGGACAACAATGGCAACCGGATGTGTGCATTGGAGGTTGCCTAACAAAGCAATTGAACTTTTTGGAGAAATGAAGATGAAGGGGATCAGACCAAATAAATTTAGTCTAGCTACCAACTTTAATGCCTGCGCTAATATGGCTAATCTGGATGAAGGGAAGAAAGCTCATGCTTTGAGGATAAAGCTCAAGTCGAGTGAAGTTGATGTATGTATCGACAATGCTCTACTTGATATGTATGCCAAATGTGGATGTATGGAGGATGCAATGAAGGTGTTTAGGAGAATGAAGGAGCACACAATTGTGACATGGACAACTATGGTGATGGGATTTGCTCAAAGCGGCCAAGTAACAGATGCTCTTGAAATTTTTGATGAAATGGTAGCTCAAGGCACTAATAAGCCCAACTATGTAACTTTCGTGTGTGTGCTTTACGCTTGTAGCCAAGGAGGGTTTGTCGAGGAGGGCTGGAAGCATTTCTCCTCAATGACTCAACAGTATGGAATTTCACCAGGAGAAGATCACTATGTTTGTATGGTCGATCTCCTTGGACGAACTGGACGCATAAAGGAAGCAGAGGAACTCATCTCAACAATGCCATTCAAACCAGGGCCGCTAATTTGGCAGACCTTACTTGGCGCCTGTCACATTCATGGGGATATTGAAGCAGGAAAGCGAGCAGCGGAGAAGGCAATGCATCTTAGTCGGAGTTACCCGTCCACTTACGTACTCTTATCCAACATGTTTGCTGGTTTGAGTCAGTGGGAAGATGTAGAGACCATGAGAGATTTGATGCAAAATCGAAATGTAAACAAACAACCTGGACTAAGTTCACTAACACTTGAGGATACTCCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_198253.p1 GENE.S_Transcript_198253~~S_Transcript_198253.p1 ORF type:complete len:464 (+),score=63.01,PPR|PF01535.16|5.4,PPR|PF01535.16|1.1,PPR|PF01535.16|51,PPR|PF01535.16|0.38,PPR|PF01535.16|1.6e-06,PPR|PF01535.16|3.2e-06,PPR|PF01535.16|6.1e-08,PPR|PF01535.16|0.91,PPR|PF01535.16|0.058,PPR|PF01535.16|3.4e+03,PPR|PF01535.16|1.7e+02,PPR_2|PF13041.2|5.4,PPR_2|PF13041.2|0.0004,PPR_2|PF13041.2|6,PPR_2|PF13041.2|1e-08,PPR_2|PF13041.2|0.00016,PPR_2|PF13041.2|1.3e-09,PPR_2|PF13041.2|0.09,PPR_2|PF13041.2|12,PPR_2|PF13041.2|7.1e+03,PPR_3|PF13812.2|3e+03,PPR_3|PF13812.2|9.2e+02,PPR_3|PF13812.2|25,PPR_3|PF13812.2|32,PPR_3|PF13812.2|0.0016,PPR_3|PF13812.2|0.01,PPR_3|PF13812.2|0.0086,PPR_3|PF13812.2|0.057,PPR_3|PF13812.2|0.87,PPR_3|PF13812.2|1.3e+03,PPR_1|PF12854.3|4.9e+02,PPR_1|PF12854.3|16,PPR_1|PF12854.3|12,PPR_1|PF12854.3|18,PPR_1|PF12854.3|0.016,PPR_1|PF12854.3|7.7e-07,PPR_1|PF12854.3|2.2e+03,PPR_1|PF12854.3|0.3 S_Transcript_198253:596-1987(+)
MYGVDIRPMEYTLVSAFNACSISGTLAPQGYQLYALVVQLGFEWNVTVINVFLTALIRNGCFRDAVRAFDECTVKDTVSWNAMIAGYSQISPFEIPHFWLRMIFEGVKPDGFIFSAVLNGLANLGDRKLGMQVHGQLVKSGHGSETCVANSVLDMYVKFGDSVEGFKAFDEISYKNVVSWTTMATGCVHWRLPNKAIELFGEMKMKGIRPNKFSLATNFNACANMANLDEGKKAHALRIKLKSSEVDVCIDNALLDMYAKCGCMEDAMKVFRRMKEHTIVTWTTMVMGFAQSGQVTDALEIFDEMVAQGTNKPNYVTFVCVLYACSQGGFVEEGWKHFSSMTQQYGISPGEDHYVCMVDLLGRTGRIKEAEELISTMPFKPGPLIWQTLLGACHIHGDIEAGKRAAEKAMHLSRSYPSTYVLLSNMFAGLSQWEDVETMRDLMQNRNVNKQPGLSSLTLEDTP*

Click here to download the sequence:
Link to NCBI Protein BLAST