Transcript Information: S_Transcript_19840.p1


Annotated TAIR IDAT1G04250.1
Annotated Gene NameAUX/IAA transcriptional regulator family protein
Annotated Gene Symbol(s)AXR3, IAA17
Annotation TypeHomolog
Chromosome Positionchr1:1136382-1138340 | Forward length=229
E-Value3E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5149246914389
Replicate 25.2728679445633
Replicate 35.1036502369712
Condition 2: 8 Hour
Replicate 14.962512212163
Replicate 24.9246207697511
Replicate 33.7537341694307
Condition 3: 24 Hour
Replicate 16.4572926041379
Replicate 26.2717465997439
Replicate 37.7728312946584


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_19840.p1 GENE.S_Transcript_19840~~S_Transcript_19840.p1 ORF type:5prime_partial len:159 (+),score=40.94 S_Transcript_19840:2-478(+)
CAGGTGCTCTGGCCAAAGCTCATTTTGTCTCTCTACGATATTGAAAAAAATTTCCCACTTTCTTCCAAACTCAAAAGAAACAAAGAACAAAAAAAGGAATTATACTTGAATTACTGCTACAAGAAGTACGGGCAAGAAGGAGGTTTTTTAGTATTTGGGGTGATGCCAGGATCAGAAGAAGTTTCAAGTATGGATTTGAAGGAAACAGAGCTAACTCTGGGTTTGCCAGGAGATGAAAAATCACGTGATTTGGGTGAGAAATTTGGGGTTAAAAGAGGTTTTTCTGATACTCTTGATTTGAACCTTGGTGGTGGGTCTTCTTCTATAAATGATCAGAAGAAGAAATCAGCTCAACATCAAGTTGTTGATGACCAATTGGAGCAATCTAGTGCCCCTAAACCTCCACCTTCCAAGTATGTCCAACCACTTTTACCTTCTTCTCTTCTTTCTTCACTGGTCAATTTTATTCATTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_19840.p1 GENE.S_Transcript_19840~~S_Transcript_19840.p1 ORF type:5prime_partial len:159 (+),score=40.94 S_Transcript_19840:2-478(+)
QVLWPKLILSLYDIEKNFPLSSKLKRNKEQKKELYLNYCYKKYGQEGGFLVFGVMPGSEEVSSMDLKETELTLGLPGDEKSRDLGEKFGVKRGFSDTLDLNLGGGSSSINDQKKKSAQHQVVDDQLEQSSAPKPPPSKYVQPLLPSSLLSSLVNFIHC*

Click here to download the sequence:
Link to NCBI Protein BLAST