Transcript Information: S_Transcript_198748.p1


Annotated TAIR IDAT2G28520.1
Annotated Gene Namevacuolar proton ATPase A1
Annotated Gene Symbol(s)VHA-A1
Annotation TypeOrtholog
Chromosome Positionchr2:12210026-12215532 | Forward length=817
E-Value4.7E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.33428469026538
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.84741850908055
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 21.7169554224506
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_198748.p1 GENE.S_Transcript_198748~~S_Transcript_198748.p1 ORF type:5prime_partial len:132 (+),score=14.56,V_ATPase_I|PF01496.15|9.3e-47 S_Transcript_198748:1-396(+)
AAAGTTCAGATTCAGGAGGCTCTAGAGAGTGCAACGTTCCACAGTAGTTCACAAGTAGGTATAATATTTCATGCCATGGATACCAAGGAGTCACCTCCGACATACTTCAGAACCAATCGTTTCACAAATGCTTTCCAAGAAGTAGTTGATGCATATGGTGTTGCTAGATATCAAGAAGCCAATCCTGCAGTCTATACTATAGTCACATTTCCATTCTTATTTGCGGTCATGTTCGGGGATTGGGGTCATGGAATATGCCTTTTTTGGTTGGCGTTATTCCTCATAGCAAGAGAAAGGAAACTTGGTTCTCAGCTTTATGGAGATGCTATTTGGTGGGCGTTACTTGGTCCTTCTAATGTCACTTTTTTCAATTTACTGTGGGCTGATCTACAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_198748.p1 GENE.S_Transcript_198748~~S_Transcript_198748.p1 ORF type:5prime_partial len:132 (+),score=14.56,V_ATPase_I|PF01496.15|9.3e-47 S_Transcript_198748:1-396(+)
KVQIQEALESATFHSSSQVGIIFHAMDTKESPPTYFRTNRFTNAFQEVVDAYGVARYQEANPAVYTIVTFPFLFAVMFGDWGHGICLFWLALFLIARERKLGSQLYGDAIWWALLGPSNVTFFNLLWADLQ*

Click here to download the sequence:
Link to NCBI Protein BLAST