Transcript Information: S_Transcript_19896.p1


Annotated TAIR IDAT1G56440.2
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)TPR5
Annotation TypeOrtholog
Chromosome Positionchr1:21138765-21141482 | Reverse length=494
E-Value4E-93
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.8710004117268
Replicate 210.046019646014
Replicate 39.7236212031184
Condition 2: 8 Hour
Replicate 114.031084696676
Replicate 213.208651375525
Replicate 314.210565069988
Condition 3: 24 Hour
Replicate 19.4708754131334
Replicate 28.8877692456264
Replicate 39.4513979034422


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_19896.p1 GENE.S_Transcript_19896~~S_Transcript_19896.p1 ORF type:complete len:459 (+),score=123.19,RPAP3_C|PF13877.2|2.3e-23,TPR_11|PF13414.2|3.1e-17,TPR_11|PF13414.2|5.4e-07,TPR_1|PF00515.24|4.7e-08,TPR_1|PF00515.24|5.8e-07,TPR_1|PF00515.24|0.038,TPR_2|PF07719.13|2e-05,TPR_2|PF07719.13|0.00011,TPR_2|PF07719.13|16,TPR_12|PF13424.2|0.18,TPR_12|PF13424.2|4.5e-05,TPR_16|PF13432.2|5.9e-06,TPR_16|PF13432.2|0.0098,TPR_16|PF13432.2|1.5e+02,TPR_16|PF13432.2|7.2e+03,TPR_8|PF13181.2|0.06,TPR_8|PF13181.2|0.021,TPR_8|PF13181.2|1.1e+04,TPR_10|PF13374.2|7.4,TPR_10|PF13374.2|0.0056 S_Transcript_19896:317-1693(+)
ATGTCAAAGGCTTCCAACAAGCAAAACCGTGATCAACCTCTGAATTTTCAGGGATTTCTGAACGACTTACAAGACTGGGAACTTTCTCTCAAAGACAAGAACTTGAAGGGCAAATCGAATATTGCTCTGCTGAGTGAGGAAAGGCAACCTGTTGGTAAAGGGAAAGCTGTTGCTCAGCATTCGAGCAATAGTGCAAGCCAGTACCGCCCTTCTGTAAACTACGATCCACTGAGCAGTATGCCAACTAGTTTCGTGTCTGAAGACAACACTGTGGATGCAGCTTCTGAGAAAGATCTGGGTAATGAATATTTTAAGCAAAAGAAGTTTAATGAGGCTATTGATTGCTATTCTAGAAGCATTGCTCTATCGCCAACAGCTGTGGCTTATGCTAATAGAGCAATGGCGTATCTGAAGATCAAAAGATTCCAAGAGGCTGAGGATGACTGTACAGAGGCTTTGAACCTGGATGATCGGTACATAAAAGCATATTCACGCCGAGCAACAGCCAGAAAGGGACTTGGAAAACTTAGAGATTCGTTAGAGGATGTGGAGTTTGCTTTAAGGTTAGAGCCACACAATGAAGAGCTCAAGAAACAACGTGCTGAAGTGAAGTCCTTGCTTGAGAAGGCCATCCTTGCAAAAGCAGCTCGAACTACTGCAAGACCTAAACAAGGTGTGAAAGAAGTTGAGAGAAAGGTTGATGCAGATAGGCTTCAAAAGGGTGTCCAGTATGTACCTGATAAGAGTAAGACAGGAGTAGATATACTTCCTGATAAAACACAGGTATCAAGGAAGAAACCTTTGGACTCTAGTGAAACAGAGAACAAAAGCATGACATCTGAAGTGAAAAGTAGAGAAGTAAATGGCTTGCATGAAGCTGCAGCAAACAGTTCTCATTTGAAAATGGATAAAACTAGCAAAAAGGAGCTGGCACCATCAGTTCAAGAGCTTGCTTCTCGGGCTGCATCTCGAGCTTTGGCAGAAGCTGCTAAAAACATCAATACACCAAGCTCAGCTTATCAATTTGAGGCTTATTGGCGAGGGTTTTCTGGCGACCATTCTCTACAGGCTCGCTTGTTGAAGGTTACTCCACCAGATGTGCTGCCACAGATATTTAAGAATGCCTTGACTGCGCCTTTACTGGTTGATTTAATCAAGTGCCTTGCATCCCTTTTCACGGAGGAGACCGAGCTAGTTCTCAAGTATTTAGAAAATTTGACCAAGGTCCCAAGATTTGACATGATCATCATGTGTCTTCCATCAGCAGACAAGGCTGATCTTTGCAGGACATGGGATGAAGTATTTCTTAGCAAGGCTGCTCCTATTGAATTTGCTGAAGTACTCAGCGAACTCCATCCCAGGTATTGCCCTCGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_19896.p1 GENE.S_Transcript_19896~~S_Transcript_19896.p1 ORF type:complete len:459 (+),score=123.19,RPAP3_C|PF13877.2|2.3e-23,TPR_11|PF13414.2|3.1e-17,TPR_11|PF13414.2|5.4e-07,TPR_1|PF00515.24|4.7e-08,TPR_1|PF00515.24|5.8e-07,TPR_1|PF00515.24|0.038,TPR_2|PF07719.13|2e-05,TPR_2|PF07719.13|0.00011,TPR_2|PF07719.13|16,TPR_12|PF13424.2|0.18,TPR_12|PF13424.2|4.5e-05,TPR_16|PF13432.2|5.9e-06,TPR_16|PF13432.2|0.0098,TPR_16|PF13432.2|1.5e+02,TPR_16|PF13432.2|7.2e+03,TPR_8|PF13181.2|0.06,TPR_8|PF13181.2|0.021,TPR_8|PF13181.2|1.1e+04,TPR_10|PF13374.2|7.4,TPR_10|PF13374.2|0.0056 S_Transcript_19896:317-1693(+)
MSKASNKQNRDQPLNFQGFLNDLQDWELSLKDKNLKGKSNIALLSEERQPVGKGKAVAQHSSNSASQYRPSVNYDPLSSMPTSFVSEDNTVDAASEKDLGNEYFKQKKFNEAIDCYSRSIALSPTAVAYANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKGLGKLRDSLEDVEFALRLEPHNEELKKQRAEVKSLLEKAILAKAARTTARPKQGVKEVERKVDADRLQKGVQYVPDKSKTGVDILPDKTQVSRKKPLDSSETENKSMTSEVKSREVNGLHEAAANSSHLKMDKTSKKELAPSVQELASRAASRALAEAAKNINTPSSAYQFEAYWRGFSGDHSLQARLLKVTPPDVLPQIFKNALTAPLLVDLIKCLASLFTEETELVLKYLENLTKVPRFDMIIMCLPSADKADLCRTWDEVFLSKAAPIEFAEVLSELHPRYCPR*

Click here to download the sequence:
Link to NCBI Protein BLAST