Transcript Information: S_Transcript_198969.p1


Annotated TAIR IDAT5G01660.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT3G11000.1); Has 16133 Blast hits to 7053 proteins in 482 species: Archae - 40; Bacteria - 1227; Metazoa - 10756; Fungi - 311; Plants - 1896; Viruses - 673; Other Eukaryotes - 1230 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:244504-248442 | Reverse length=656
E-Value2E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6935546240569
Replicate 21.8624432743357
Replicate 30.83830618561821
Condition 2: 8 Hour
Replicate 11.9109765349119
Replicate 21.8594783284968
Replicate 33.1558527622959
Condition 3: 24 Hour
Replicate 10.73761944253954
Replicate 20.76527155972082
Replicate 31.1792124656937


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_198969.p1 GENE.S_Transcript_198969~~S_Transcript_198969.p1 ORF type:complete len:770 (+),score=161.51,Dev_Cell_Death|PF10539.5|3.5e-50,Kelch_1|PF01344.21|0.0078,Kelch_1|PF01344.21|1.3e-09,Kelch_1|PF01344.21|0.00011,Kelch_1|PF01344.21|9.6e-12,Kelch_1|PF01344.21|1.8e-08,Kelch_1|PF01344.21|7.5e-05,Kelch_1|PF01344.21|5.1e+03,Kelch_6|PF13964.2|9.3,Kelch_6|PF13964.2|3.5e-07,Kelch_6|PF13964.2|65,Kelch_6|PF13964.2|0.00011,Kelch_6|PF13964.2|0.094,Kelch_6|PF13964.2|19,Kelch_2|PF07646.11|26,Kelch_2|PF07646.11|46,Kelch_2|PF07646.11|3.2e+02,Kelch_2|PF07646.11|9e-05,Kelch_2|PF07646.11|0.0011,Kelch_2|PF07646.11|28,Kelch_4|PF13418.2|5e+02,Kelch_4|PF13418.2|0.11,Kelch_4|PF13418.2|3.7,Kelch_4|PF13418.2|0.35,Kelch_4|PF13418.2|0.088,Kelch_4|PF13418.2|2.6,Kelch_3|PF13415.2|64,Kelch_3|PF13415.2|1.3,Kelch_3|PF13415.2|0.61,Kelch_3|PF13415.2|1.8e-05,Kelch_3|PF13415.2|1.2e+03,Kelch_5|PF13854.2|4.4e+02,Kelch_5|PF13854.2|1.1e+03,Kelch_5|PF13854.2|11,Kelch_5|PF13854.2|4.8,Kelch_5|PF13854.2|0.013,Kelch_5|PF13854.2|95 S_Transcript_198969:275-2584(+)
ATGGGCGCAGGTAGGAAAACAGAAACAATAGTGCTCCAGAAGAGTCCTCCGCCTCAATGGCATCCAAATAATAATCCTCCAACTGCTAGGAATCTGGGGAAAAACCGACTTGCTGGTGTTATTTTTGGATGCAAACATTCCACTTACAAGGAGTGCATTTTTAAGCAGTTGTTTGGTTTACCAGCTGGACATTTTCAATATGTGCAATATGTTACTCAGGGTATGCCATTATTCCTATTCAACTATAGTGATAGGAAGCTTCATGGCATCTTTGAGGCCATATCTGCTGGACAAATGGAAATCAATCAGTTTGCATGGACAACAGACAGTCAAGAAAAGACACCCTTTCCTGCACAGGTTCGAGTGAAAATCCGAATGCAGTGCCAACCTTTAACTGAGGACCAGTATCAACCCATCTTGGCGGATAATTATTCTCCACATGAACCTAATCATTTTTGGTTTGAGCTAGACAAATCTCAGACTGAAGAGCTGATCTCCATATTCTCAGCTTGTCCAGTTAGACAAAGTGCATCAACCCTGCACCCAGCAGCAAAGTGGGGCACGCTATTCAGACAATCATATGCTGCAGCAACTCATCAGGATTGCAGCAAAGCTGATTCGCAGTTGAGATCCACTTGCAATTTCATAGGAAACGATAGAGGGAAAAAAAAGTTGGAAGCTCCTCCAGGCGAGGATGCACCTGAGATTGTGAATGTCACTTCTTCCTGTCAAGGGAAGTCATGGAGTTCTTTGTTTAAACCTGGACCAGCTGAAGAGCTAAAAGCTGCAGGCACAGGACGTGATGTTCATGACCAAGATCTCCGAGTACCCTATTCAGAAGTTGCTGGCTTTTCTGGTACAGCCAATGTAATTACCACTCAGACAGAAAATTCAGACAAATTTGCGGTTGTTGCTGATGTATTCAATGATGAGCAAGATACAAAAACAGCGGCTTTAGATGAGGATTGCTCTCATGAATCAAACATGGAGTGGGCTTCCTCTTTTCCTCACTTGGATGGTCTGATTGAGCTAGTAGAAGAGCCTTGGGATGCAACCATATGCGAGGAAGAACATGTGACACCGAAACCATGCAGTGAAGGATCTAATATTTCTGCAATGTCAGGAATTCCAGATTTGGAGGATAATGCTGCTCATTTTACTCCTGTGCTCAATGAAGCAAATGCAGAAGCCACCTTGTTTTCTGATGTTATGATGTCAGAGATGAATTCTTTAGATTTTCAGACTATTCTCACAAAGTTGATTCAAACAATTGGGGAGATGAAATCATTTCAGTGCACTCAAGCGCAGAAGATCCAGACCTTGGAGCAGGAATTGGTGGAATCAAACAGAAAAATTGTCGAATTGAAATACAATTGGGGAACATATGGGCTGCCCATGTCTTCTCTTTCACTTGGCTGTGTCAAGGAGACTGATTCAAAAAAATACTTTGAGGAGTTTACTGATTCTATATTTATAGTGGGTGGCTTTAATGGGTCCTCTTGGTTGCCAACTTTGGAATGTTACTCACCGTATAAGGATAGCATGCGATCACTGAAATCGATGACTTCTGTTCGATCGTATGCTTCTTCGGTGATCTTTGGTGACGGGCTCTACGTTTTAGGTGGTGGATATGGTACATCCTGGTACAGCACAGTTGAGTCTTACAACCTGAAAAACCATCAGTGGGTTAGTTGTCCTTCGTTGAATAGGAAGAAAGGGAGTCTAGCAGCTGCTTGTTTAAGTGAGAAGATCTTTGCAATTGGAGGTGGGAACACAACTGATTGTTTTTCTGAAGTAGAGATGCTTGATCTGAATTTAGGGAAGTGGATATTGACCAGGTCAATGGGGAGCAAGCGTTTTGCCTCAGCTGCAGTGGTAATGGATGGTGTGCTGTATGTAGGGGGTGGATATGATGGGCAGGAATACCTAAAGTCCGTGGAAAGACTTGATCCTCGTGAATATTCATGGACTGCACTGAAGAGTATGAGCACACCGAGAGGATGCCACTCTTTCACTGTGCTGAATGAAAAGCTGTATGCTATTGGTGGGTATGATGGATCTCAGATGGTCCCAACTGTTGAAGTGTTTGAACCTCGTGTTGGTTCTTGGATGATGTCAGAGCCAATGAGATATGCCAGGGGTTATATGGGTGCTGTTACGCTTGGAAATAGAATCTTTGCGCTGGGTGGAATCCAGGAGAATGAAGAGATCTTAGACACAGTGGAGTCTTATTCTGAAGGTGAGGGGTGGCGATTGATGGACCTCAAATGTATGGAGAAAAGATGCTTCTTCTCCGCTGTTGTGGTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_198969.p1 GENE.S_Transcript_198969~~S_Transcript_198969.p1 ORF type:complete len:770 (+),score=161.51,Dev_Cell_Death|PF10539.5|3.5e-50,Kelch_1|PF01344.21|0.0078,Kelch_1|PF01344.21|1.3e-09,Kelch_1|PF01344.21|0.00011,Kelch_1|PF01344.21|9.6e-12,Kelch_1|PF01344.21|1.8e-08,Kelch_1|PF01344.21|7.5e-05,Kelch_1|PF01344.21|5.1e+03,Kelch_6|PF13964.2|9.3,Kelch_6|PF13964.2|3.5e-07,Kelch_6|PF13964.2|65,Kelch_6|PF13964.2|0.00011,Kelch_6|PF13964.2|0.094,Kelch_6|PF13964.2|19,Kelch_2|PF07646.11|26,Kelch_2|PF07646.11|46,Kelch_2|PF07646.11|3.2e+02,Kelch_2|PF07646.11|9e-05,Kelch_2|PF07646.11|0.0011,Kelch_2|PF07646.11|28,Kelch_4|PF13418.2|5e+02,Kelch_4|PF13418.2|0.11,Kelch_4|PF13418.2|3.7,Kelch_4|PF13418.2|0.35,Kelch_4|PF13418.2|0.088,Kelch_4|PF13418.2|2.6,Kelch_3|PF13415.2|64,Kelch_3|PF13415.2|1.3,Kelch_3|PF13415.2|0.61,Kelch_3|PF13415.2|1.8e-05,Kelch_3|PF13415.2|1.2e+03,Kelch_5|PF13854.2|4.4e+02,Kelch_5|PF13854.2|1.1e+03,Kelch_5|PF13854.2|11,Kelch_5|PF13854.2|4.8,Kelch_5|PF13854.2|0.013,Kelch_5|PF13854.2|95 S_Transcript_198969:275-2584(+)
MGAGRKTETIVLQKSPPPQWHPNNNPPTARNLGKNRLAGVIFGCKHSTYKECIFKQLFGLPAGHFQYVQYVTQGMPLFLFNYSDRKLHGIFEAISAGQMEINQFAWTTDSQEKTPFPAQVRVKIRMQCQPLTEDQYQPILADNYSPHEPNHFWFELDKSQTEELISIFSACPVRQSASTLHPAAKWGTLFRQSYAAATHQDCSKADSQLRSTCNFIGNDRGKKKLEAPPGEDAPEIVNVTSSCQGKSWSSLFKPGPAEELKAAGTGRDVHDQDLRVPYSEVAGFSGTANVITTQTENSDKFAVVADVFNDEQDTKTAALDEDCSHESNMEWASSFPHLDGLIELVEEPWDATICEEEHVTPKPCSEGSNISAMSGIPDLEDNAAHFTPVLNEANAEATLFSDVMMSEMNSLDFQTILTKLIQTIGEMKSFQCTQAQKIQTLEQELVESNRKIVELKYNWGTYGLPMSSLSLGCVKETDSKKYFEEFTDSIFIVGGFNGSSWLPTLECYSPYKDSMRSLKSMTSVRSYASSVIFGDGLYVLGGGYGTSWYSTVESYNLKNHQWVSCPSLNRKKGSLAAACLSEKIFAIGGGNTTDCFSEVEMLDLNLGKWILTRSMGSKRFASAAVVMDGVLYVGGGYDGQEYLKSVERLDPREYSWTALKSMSTPRGCHSFTVLNEKLYAIGGYDGSQMVPTVEVFEPRVGSWMMSEPMRYARGYMGAVTLGNRIFALGGIQENEEILDTVESYSEGEGWRLMDLKCMEKRCFFSAVVV*

Click here to download the sequence:
Link to NCBI Protein BLAST