Transcript Information: S_Transcript_19900.p2


Annotated TAIR IDAT5G51680.1
Annotated Gene Namehydroxyproline-rich glycoprotein family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:20997591-20998755 | Forward length=343
E-Value1E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.090829355751469
Replicate 20
Replicate 30.062944491752903
Condition 2: 8 Hour
Replicate 10
Replicate 20.30541772886999
Replicate 30.072750333122803
Condition 3: 24 Hour
Replicate 10.44733549810091
Replicate 20.23205267825612
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_19900.p2 GENE.S_Transcript_19900~~S_Transcript_19900.p2 ORF type:complete len:293 (-),score=65.47,DUF688|PF05097.8|0.0099,DUF688|PF05097.8|1.9e-06 S_Transcript_19900:2500-3378(-)
ATGGAAGACAAGAAGGAAAACCAAGAGAAAACAGAGACTGAAAGGAGAGTTAAACAGCAAATTACAGTACCATTTGTATGGGAAGAAAGGCCAGGAGCACCCAAGAAGGATTGGAAGCCGAAACGCGAGCCATCACCTCCTCCTCCGGCTCCCCTTCCTGTGGCTGTCAAGTACATCGCTTCCGTTCCATTCAAGTGGGAGGAAAAACCCGGGACACCACTCCAGAGTTTTGCTCAGGAATCAACTGAGCCAGCAGTTCCAGAAACAGTGCCGGGAAACAAGTGTTTACCACTCCCTCCAGCATACCACACAAAGGACGGTAATGAAAGTGACGATCAAAGCTCCTACTGTGATGATTATGATTGGATGTCGGATATTGAAACACTTAGCATCCACACAGAAGATGAATCCTTCAGCTCAGCTCCCTCCCTCCGGGCAAACCATCTCACGCCACCAAGGGAGGCAATATCTTCTTCTGTAGTACGCTTGCAGAACCCTTTTGTAGTACAGCAAAATGATGGGCCTATGAAGACCCTGTCTTCACCGGAGAACACCCACAGTCCAAGCAGATATGTAAATGGAAATACAAGCTTGAAGGGTGCTTTGTTCTTGGAGCAACTTTTTCCTCTTTATCCACCTAAGTCTGGCTTCCTTGGCAAGGCTTTCAACTCTAAAGAGAACATTCAGCACCTTGAAATGGGACCTTCCATTTTGGAAGAGCACAAGAAACTTGCTGGTGATGGTCGGCGTAGTGGTGTGATGAGAAGGCCACTGACCCTGGGGGAGCTGATAATGCAGAGTCGAAGAAGAAGTTACTGCAGAAAGGCAGTTCAGATGAAGAAACAGAATCGGCAAAAGGTAGTTTATACTACTCCGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_19900.p2 GENE.S_Transcript_19900~~S_Transcript_19900.p2 ORF type:complete len:293 (-),score=65.47,DUF688|PF05097.8|0.0099,DUF688|PF05097.8|1.9e-06 S_Transcript_19900:2500-3378(-)
MEDKKENQEKTETERRVKQQITVPFVWEERPGAPKKDWKPKREPSPPPPAPLPVAVKYIASVPFKWEEKPGTPLQSFAQESTEPAVPETVPGNKCLPLPPAYHTKDGNESDDQSSYCDDYDWMSDIETLSIHTEDESFSSAPSLRANHLTPPREAISSSVVRLQNPFVVQQNDGPMKTLSSPENTHSPSRYVNGNTSLKGALFLEQLFPLYPPKSGFLGKAFNSKENIQHLEMGPSILEEHKKLAGDGRRSGVMRRPLTLGELIMQSRRRSYCRKAVQMKKQNRQKVVYTTP*

Click here to download the sequence:
Link to NCBI Protein BLAST