Transcript Information: S_Transcript_199034.p1


Annotated TAIR IDAT3G25900.1
Annotated Gene NameHomocysteine S-methyltransferase family protein
Annotated Gene Symbol(s)HMT-1, ATHMT-1
Annotation TypeOrtholog
Chromosome Positionchr3:9480964-9482684 | Forward length=326
E-Value5.7E-180
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.2954441233267
Replicate 22.3638703097337
Replicate 32.3994376027133
Condition 2: 8 Hour
Replicate 12.1760602364421
Replicate 21.5979891885519
Replicate 31.8488235167586
Condition 3: 24 Hour
Replicate 11.7832557951505
Replicate 22.2548179884631
Replicate 32.444994100496


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_199034.p1 GENE.S_Transcript_199034~~S_Transcript_199034.p1 ORF type:complete len:392 (+),score=66.67,S-methyl_trans|PF02574.12|7.9e-67 S_Transcript_199034:147-1322(+)
ATGCAAATACAACACAAATACAAGCAAACCGAACCAACCCCATGTCCCATATTAAATTTCCCATTTCATAATCTTCACTATTTGTGCAACCACCCCAGATCTCTCCTTCTGTTATTTCTACTACTGATCATCTCATCTCTGTGTGAATTGAGTCTAAAATTCTGGGTAAGAGAGAAAAAAAGAGAGATGGGTATTGAAAAGGCAACAGCAATGTTGGAAGAAATGATAGAAAAGGCAGGAGGATGTGGTGTTGTTGATGGTGGATTGGCTACCCAGCTTGAGAAACATGGTGCCTCCATTAATGACCCTCTTTGGAGTGCCCTTTGCTTAGTCAAAGACCCCCATCTAATCAAACAGGTACACTTGGAATATCTGGAGGCAGGTGCAGATGTTTTGATTACTTCATCTTATCAGGCCACCCTTCCAGGGTTTTTGTCGAGAGGGCTGTCAATGCAAGAAGCAGAGTTGTTGCTAGAGAAGAGTGTCAGATTGGCTATTGAAGCCCGTGATCAGTTCTGGAATTCAGTTGGCAAAATCACTGACAGTGGTTATAATAGGGCCCTTGTTGCAGCATCTGTTGGAAGCTATGGAGCATACCTTGCTGATGGATCAGAATATAGTGGAATTTACGGAGAAGATGTTGGCCTGTCTAAGTTAAAGGATTTCCATAGGCGTAGACTACAAGTTCTAGCAGGAGCTAGTCCAGATTTGATAGCATTTGAGACAATTCCGAATAAACTCGAAACTCAGGCCATTGTTGAACTGCTCGAGGAAGAAAATATACAGATTCCATCCTGGATATGCTTTAGCTCTGTAGATGGTGAGCATGCTCCATCAGGGGAAAGCTTTAAAGAATGCCTTGACGTAATTAACAAAAGCAAGAAAGTTGCCATGACAGGAATAAATTGTGCACCACCCCACTTTGTTGAGGATCTAATTCGCAAATTCAAGAAGTTGACAGACAAGGCAATAGTAGTGTATCCTAATAGTGGCGAGATATGGGATGGAAGAGCTAAAAAGTGGCTGCCATCTCAGTGCTCTGACGATGATGCTCTCGAGTCACTAGCGTCAAGATGGCGCAATTCAGGTGCCAAACTGATCGGGGGATGTTGCAGGACAACACCTTCAACTATTCAGGGCATTTGCAAAGCTATAAAGAGGACACCTTCTATCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_199034.p1 GENE.S_Transcript_199034~~S_Transcript_199034.p1 ORF type:complete len:392 (+),score=66.67,S-methyl_trans|PF02574.12|7.9e-67 S_Transcript_199034:147-1322(+)
MQIQHKYKQTEPTPCPILNFPFHNLHYLCNHPRSLLLLFLLLIISSLCELSLKFWVREKKREMGIEKATAMLEEMIEKAGGCGVVDGGLATQLEKHGASINDPLWSALCLVKDPHLIKQVHLEYLEAGADVLITSSYQATLPGFLSRGLSMQEAELLLEKSVRLAIEARDQFWNSVGKITDSGYNRALVAASVGSYGAYLADGSEYSGIYGEDVGLSKLKDFHRRRLQVLAGASPDLIAFETIPNKLETQAIVELLEEENIQIPSWICFSSVDGEHAPSGESFKECLDVINKSKKVAMTGINCAPPHFVEDLIRKFKKLTDKAIVVYPNSGEIWDGRAKKWLPSQCSDDDALESLASRWRNSGAKLIGGCCRTTPSTIQGICKAIKRTPSI*

Click here to download the sequence:
Link to NCBI Protein BLAST