Transcript Information: S_Transcript_199038.p1


Annotated TAIR IDAT1G20080.1
Annotated Gene NameCalcium-dependent lipid-binding (CaLB domain) family protein
Annotated Gene Symbol(s)SYTB, ATSYTB, NTMC2TYPE1.2, NTMC2T1.2, SYT2
Annotation TypeOrtholog
Chromosome Positionchr1:6962236-6964912 | Forward length=537
E-Value3.1E-234
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5155467673793
Replicate 20.85436770496071
Replicate 30.9242373435973
Condition 2: 8 Hour
Replicate 11.1658527736018
Replicate 21.5288279252661
Replicate 31.6023302299872
Condition 3: 24 Hour
Replicate 10.89568998366901
Replicate 21.0841458840622
Replicate 30.74689425345446


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_199038.p1 GENE.S_Transcript_199038~~S_Transcript_199038.p1 ORF type:complete len:439 (+),score=91.77,C2|PF00168.26|4.5e-24,C2|PF00168.26|2.9,SMP_LBD|PF17047.1|3.1e-17 S_Transcript_199038:295-1611(+)
ATGCGATCCATCAAAAGGGACCCCGAGATTCGTCCGCTGGCAGAGCAAGATTCAGAAACGCTTCAACGACTGCTTCCTGAAATACCCCTTTGGGTGAAGAACCCTGACTATGATCGTATGGATTGGCTGAACAAGTTTATTGGTCACATGTGGCCTTATCTGGACAAGGCAATTTGCAAAACTGTTAAGAATATTGCAACGCCTATTATTGCTGAACAAATTCCCAAATACAAAATTGACTTGGTTGAATTTGAGAAACTTACTCTGGGATCCCTCCCACCTACTTTCCAAGGTATGAAAGTATATGTTACAGAAGAGAAGGAGTTGATCATGGAACCTTCACTGAAGTGGGCAGCAAATCCAAATATCTTGGTTTCTGTAAAAGCATTTGGCTTGAAAGCAACTGCACAGGTGGTTGATCTTCAAGTCTTTGCTTCTCCACGTATTACTCTGAAGCCTTTGGTTCCAAGCTTCCCATGTTTTTCAAAAATATTTGTCTCTCTTATGGAGAAGCCACATGTTGACTTTGGACTAAAGCTTTTAGGAGCTGATCTTATGTCGATTCCGGGCTTGTACAGGTTTGTTCAGGAACTAATCACAGATCAAGTTGCTAATATGTATCTGTGGCCGCGTACACTTGAAGTGCCTATTCTTGATCCTACAAAAGCTCTGCGAAGGCCTGTGGGCATTCTACATGTCAAGGTTATAAGAGCGATGAAGCTGAAGAAGAAAGATCTCATGGGCGCATCAGACCCATATGTGAAACTTAAGCTCACTGACGACAAAGTCCCGTCTAAGAAAACCACAGTGAAGCACAAAAACTTAAATCCTGAATGGAATGAAGAGTTTAAGTTGACTGTCAGAGATCCAGAGACCCAGGCAATAGATATTAATGTCTATGATTGGGAGCAGGTTGGGAAACACGACAAAATGGGTATGAATTCCATTCCGTTGAAAGAACTTACACCTGATGAGCCGAAGGTGTTTACTCTCGACCTCCTCAAAACCTTGGACCCTAATGATCCTCAGAATGACAAGTCACGTGGACAGCTTGTGGTTGAATTGACATATAAAGCATTCAATGAAGAGGAACTTGGGAGAGATTTTGAAGATAAAGTGGCAGATGCTCCCGAGGGAACTCCTCCTGGCGGAGGTGTCCTTGCTATAATAGTACATGAAGCTCAAGATCTGGAAGGAAAGCACCATACGAATCCATCTGTGCGTGTCATTTTCAGAGGAGATGAGAGAAAAACCAAGGTGACTTGCAATATTTTGTTCCTATACTCTGGATTTGATCTGGAAATGTATGACAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_199038.p1 GENE.S_Transcript_199038~~S_Transcript_199038.p1 ORF type:complete len:439 (+),score=91.77,C2|PF00168.26|4.5e-24,C2|PF00168.26|2.9,SMP_LBD|PF17047.1|3.1e-17 S_Transcript_199038:295-1611(+)
MRSIKRDPEIRPLAEQDSETLQRLLPEIPLWVKNPDYDRMDWLNKFIGHMWPYLDKAICKTVKNIATPIIAEQIPKYKIDLVEFEKLTLGSLPPTFQGMKVYVTEEKELIMEPSLKWAANPNILVSVKAFGLKATAQVVDLQVFASPRITLKPLVPSFPCFSKIFVSLMEKPHVDFGLKLLGADLMSIPGLYRFVQELITDQVANMYLWPRTLEVPILDPTKALRRPVGILHVKVIRAMKLKKKDLMGASDPYVKLKLTDDKVPSKKTTVKHKNLNPEWNEEFKLTVRDPETQAIDINVYDWEQVGKHDKMGMNSIPLKELTPDEPKVFTLDLLKTLDPNDPQNDKSRGQLVVELTYKAFNEEELGRDFEDKVADAPEGTPPGGGVLAIIVHEAQDLEGKHHTNPSVRVIFRGDERKTKVTCNILFLYSGFDLEMYDS*

Click here to download the sequence:
Link to NCBI Protein BLAST