Transcript Information: S_Transcript_199040.p1


Annotated TAIR IDAT1G20080.1
Annotated Gene NameCalcium-dependent lipid-binding (CaLB domain) family protein
Annotated Gene Symbol(s)SYTB, ATSYTB, NTMC2TYPE1.2, NTMC2T1.2, SYT2
Annotation TypeOrtholog
Chromosome Positionchr1:6962236-6964912 | Forward length=537
E-Value6.4E-301
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.2394102627092
Replicate 22.189752521626
Replicate 31.8649957837349
Condition 2: 8 Hour
Replicate 12.5558520230272
Replicate 21.0054763433585
Replicate 32.4349563743518
Condition 3: 24 Hour
Replicate 11.8817689898265
Replicate 22.122079735613
Replicate 32.5033115233542


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_199040.p1 GENE.S_Transcript_199040~~S_Transcript_199040.p1 ORF type:5prime_partial len:534 (+),score=98.92,C2|PF00168.26|6.2e-24,C2|PF00168.26|7.5e-14,SMP_LBD|PF17047.1|8.8e-17 S_Transcript_199040:2-1603(+)
TTCGGCTTCGTTGGATTTGGGATTGGAATTACAATCGGTCTAACCCTAGGTTACTACTTCTTCATCTACTTCCAGTCTACCGATGTCGAGGACCCCGAGATTCGTCCGCTGGCAGAGCAAGATTCAGAAACGCTTCAACGACTGCTTCCTGAAATACCCCTTTGGGTGAAGAACCCTGACTATGATCGTATGGATTGGCTGAACAAGTTTATTGGTCACATGTGGCCTTATCTGGACAAGGCAATTTGCAAAACTGTTAAGAATATTGCAACGCCTATTATTGCTGAACAAATTCCCAAATACAAAATTGACTTGGTTGAATTTGAGAAACTTACTCTGGGATCCCTCCCACCTACTTTCCAAGGTATGAAAGTATATGTTACAGAAGAGAAGGAGTTGATCATGGAACCTTCACTGAAGTGGGCAGCAAATCCAAATATCTTGGTTTCTGTAAAAGCATTTGGCTTGAAAGCAACTGCACAGGTGGTTGATCTTCAAGTCTTTGCTTCTCCACGTATTACTCTGAAGCCTTTAGTCCCAAGCTTCCCATGTTTTGCAAAAATATTTATGTCTCTTATGGAGAAGCCACATGTTGACTTTGGACTAAAGCTTTTAGGAGCTGATCTTATGTCGATTCCGGGCTTGTACAGGTTTGTTCAGGAACTAATCACAGATCAAGTTGCTAATATGTATCTGTGGCCGCGTACACTTGAAGTGCCTATTCTTGATCCTACAAAAGCTCTGCGAAGGCCTGTGGGCATTCTACATGTCAAGGTTATAAGAGCGATGAAGCTGAAGAAGAAAGATCTCATGGGCGCATCAGACCCATATGTGAAACTTAAGCTCACTGACGACAAAGTCCCGTCTAAGAAAACCACAGTGAAGCACAAAAACTTAAATCCTGAATGGAATGAAGAGTTTAAGTTGACTGTCAGAGATCCAGAGACCCAGGCAATAGATATTAATGTCTATGATTGGGAGCAGGTTGGGAAACACGACAAAATGGGTATGAATTCCATTCCGTTGAAAGAACTTACACCTGATGAGCCGAAGGTGTTTACTCTCGACCTCCTCAAAACCTTGGACCCTAATGATCCTCAGAATGACAAGTCACGTGGACAGCTTGTGGTTGAATTGACATATAAAGCATTCAATGAAGAGGAACTTGGGAGAGATTTTGAAGATAAAGTGGCAGATGCTCCCGAGGGAACTCCTCCTGGCGGAGGTGTCCTTGCTATAATAGTACATGAAGCTCAAGATCTGGAAGGAAAGCACCATACGAATCCATCTGTGCGTGTCATTTTCAGAGGAGATGAGAGAAAAACCAAGACTATGAAGAAGAACAGAGACCCACGATGGGAAGAACAATTCCAGTTCATTGTTGATGAACCTCCTACAAATGATAAGCTGCATGTAGAAGTTTACAGCACCTCATCTAGAATGGGCCTATTGCATCCTAAGGAATCTTTGGGGTATGTCGATATTATTCTTGCTGATGTTGTGAACAACAAGCGGATCAACGAGAGGTATCATCTAATAGATTCGAAAAACGGGCGGATCCAAATCGAGCTGCAGTGGAGGGCGGCCCCCTCCAAGTCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_199040.p1 GENE.S_Transcript_199040~~S_Transcript_199040.p1 ORF type:5prime_partial len:534 (+),score=98.92,C2|PF00168.26|6.2e-24,C2|PF00168.26|7.5e-14,SMP_LBD|PF17047.1|8.8e-17 S_Transcript_199040:2-1603(+)
FGFVGFGIGITIGLTLGYYFFIYFQSTDVEDPEIRPLAEQDSETLQRLLPEIPLWVKNPDYDRMDWLNKFIGHMWPYLDKAICKTVKNIATPIIAEQIPKYKIDLVEFEKLTLGSLPPTFQGMKVYVTEEKELIMEPSLKWAANPNILVSVKAFGLKATAQVVDLQVFASPRITLKPLVPSFPCFAKIFMSLMEKPHVDFGLKLLGADLMSIPGLYRFVQELITDQVANMYLWPRTLEVPILDPTKALRRPVGILHVKVIRAMKLKKKDLMGASDPYVKLKLTDDKVPSKKTTVKHKNLNPEWNEEFKLTVRDPETQAIDINVYDWEQVGKHDKMGMNSIPLKELTPDEPKVFTLDLLKTLDPNDPQNDKSRGQLVVELTYKAFNEEELGRDFEDKVADAPEGTPPGGGVLAIIVHEAQDLEGKHHTNPSVRVIFRGDERKTKTMKKNRDPRWEEQFQFIVDEPPTNDKLHVEVYSTSSRMGLLHPKESLGYVDIILADVVNNKRINERYHLIDSKNGRIQIELQWRAAPSKS*

Click here to download the sequence:
Link to NCBI Protein BLAST