Transcript Information: S_Transcript_19945.p1


Annotated TAIR IDAT5G67385.1
Annotated Gene NamePhototropic-responsive NPH3 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26884754-26887083 | Forward length=604
E-Value1.8E-200
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.241380032724
Replicate 219.074601355594
Replicate 316.694214829625
Condition 2: 8 Hour
Replicate 110.590487290675
Replicate 211.009171565373
Replicate 312.317961595655
Condition 3: 24 Hour
Replicate 120.513479756405
Replicate 221.333655592182
Replicate 323.798678468033


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_19945.p1 GENE.S_Transcript_19945~~S_Transcript_19945.p1 ORF type:complete len:443 (+),score=89.61,NPH3|PF03000.10|4.6e+03,NPH3|PF03000.10|1.1e-67,BTB|PF00651.27|4.4e-08,BTB|PF00651.27|3.3e+03 S_Transcript_19945:622-1950(+)
ATGATATTCTCCCAGGAAATTCCTAGTGATGTTACTATTCAAATTGGTGACGTTTCCTTTTCCTTACACAAGTTCCCGCTAGTGTCGAAAAGTGGACGAATAAGGAAATTGTTGTCAGAATGTAACAGTACTGATCTTTCAGTCATTGAACTCTCGGACATTCCGGGAGGGCCAGAAGCTTTTGAAGTAGCGGCAAAATTCTGTTATGGGATAAACTTTGAGATTAGCACTGAGAACATTGCCATGCTTCGCTGCGTGGCTGAGTATCTTGAGATGACAGAGGATAATGCGGTTGGAAACCTTATTGGAAGGGCAGAGGCTTACTTGAATGAAGTAGCTCTTAAGAGCCTATCCACTTGTGTTTCGGTTCTGCTTGCCTCGGAAAACCTCCTGCCTATGGCAGAGCAAATTAAGTTGGTGGGCCGTTGCATTGATGCAATAGCTTATTTAGCCTGCAAGGATAGCCAATTTTCAGGTACGAGCAGGGCTGAAGCTGGCATTGAAGGTGGAAACTCCTCGTTAGTTCCTCAACAAAAACCCATTGTGGATTGGTGGGCTGAAGATGTGACTATGCTTAGAATAGATATGTTCCAAAGGGTTCTGATAGCTATGACGGCTAGAGGATTTAAGCAATATGCTCTTGGTCCCATCCTCATGCTCTATGCTCAAAAGTCTCTAAGAGGTTTGGAAGCCTTTGGGAAGGGAAGAAAGAAAATTGAGCCCAAGCAAGAACATGAAAAGAGGGTTGTGTTAGAGACCATTGTGAGCCTGCTACCTAGGGAGAGAAATGCATTGTCAGTGAGCTTCCTTTCCATGCTGCTTCGCTCTTCAATATATCTGGAGACAACAGATGCTTGCAGGCATGATTTGGAGAAAAGGATGGCCTCACAACTCGGTCAGGCTGTTCTAGATGACCTTTTGATTCCTTCATATTCTTTTACTGGGGACACTTTGTTTGATGTGGATGCAGTCAGGAGAATCATGATGAACTACCTTGAGTATGAAGTGGAGGGAAATCATCGCCTGGGATATGGTTCAGGAGAAGAACATTTTGCTCCTCCTAACGATTTGGAGAGGGTCGGTAAGTTGATGGAGAATTACCTGGCTGAGATAGCTTCTGACCGCAACATGACTGTTTCTAAGTTCATTGGCCTTGCCGAGCTTGTTCCTGAACAATCAAGGGTCACAGAGGATGGAATGTATAGAGCAATTGATATCTTCCTCAAGGTACGTTATATTTCACACACAAAATATCAGAATAATAGAATGTCATCCTTCCTTATTCTTTCCCTCAAGTTGAAGGAGTTGGTTATCAGATCTGTTCTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_19945.p1 GENE.S_Transcript_19945~~S_Transcript_19945.p1 ORF type:complete len:443 (+),score=89.61,NPH3|PF03000.10|4.6e+03,NPH3|PF03000.10|1.1e-67,BTB|PF00651.27|4.4e-08,BTB|PF00651.27|3.3e+03 S_Transcript_19945:622-1950(+)
MIFSQEIPSDVTIQIGDVSFSLHKFPLVSKSGRIRKLLSECNSTDLSVIELSDIPGGPEAFEVAAKFCYGINFEISTENIAMLRCVAEYLEMTEDNAVGNLIGRAEAYLNEVALKSLSTCVSVLLASENLLPMAEQIKLVGRCIDAIAYLACKDSQFSGTSRAEAGIEGGNSSLVPQQKPIVDWWAEDVTMLRIDMFQRVLIAMTARGFKQYALGPILMLYAQKSLRGLEAFGKGRKKIEPKQEHEKRVVLETIVSLLPRERNALSVSFLSMLLRSSIYLETTDACRHDLEKRMASQLGQAVLDDLLIPSYSFTGDTLFDVDAVRRIMMNYLEYEVEGNHRLGYGSGEEHFAPPNDLERVGKLMENYLAEIASDRNMTVSKFIGLAELVPEQSRVTEDGMYRAIDIFLKVRYISHTKYQNNRMSSFLILSLKLKELVIRSVL*

Click here to download the sequence:
Link to NCBI Protein BLAST