Transcript Information: S_Transcript_19946.p1


Annotated TAIR IDAT5G67385.1
Annotated Gene NamePhototropic-responsive NPH3 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26884754-26887083 | Forward length=604
E-Value7.5E-259
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 130.73752541185
Replicate 237.124103462091
Replicate 332.734155188974
Condition 2: 8 Hour
Replicate 125.6927673009
Replicate 223.156101636322
Replicate 325.917239062145
Condition 3: 24 Hour
Replicate 138.168089788916
Replicate 234.41386886962
Replicate 337.833066607674


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_19946.p1 GENE.S_Transcript_19946~~S_Transcript_19946.p1 ORF type:3prime_partial len:542 (+),score=114.77,NPH3|PF03000.10|7.5e+03,NPH3|PF03000.10|7e-84,BTB|PF00651.27|6.1e-08 S_Transcript_19946:775-2397(+)
ATGATATTCTCCCAGGAAATTCCTAGTGATGTTACTATTCAAATTGGTGACGTTTCCTTTTCCTTACACAAGTTCCCGCTAGTGTCGAAAAGTGGACGAATAAGGAAATTGTTGTCAGAATGTAACAGTACTGATCTTTCAGTCATTGAACTCTCGGACATTCCGGGAGGGCCAGAAGCTTTTGAAGTAGCGGCAAAATTCTGTTATGGGATAAACTTTGAGATTAGCACTGAGAACATTGCCATGCTTCGCTGCGTGGCTGAGTATCTTGAGATGACAGAGGATAATGCGGTTGGAAACCTTATTGGAAGGGCAGAGGCTTACTTGAATGAAGTAGCTCTTAAGAGCCTATCCACTTGTGTTTCGGTTCTGCTTGCCTCGGAAAACCTCCTGCCTATGGCAGAGCAAATTAAGTTGGTGGGCCGTTGCATTGATGCAATAGCTTATTTAGCCTGCAAGGATAGCCAATTTTCAGGTACGAGCAGGGCTGAAGCTGGCATTGAAGGTGGAAACTCCTCGTTAGTTCCTCAACAAAAACCCATTGTGGATTGGTGGGCTGAAGATGTGACTATGCTTAGAATAGATATGTTCCAAAGGGTTCTGATAGCTATGACGGCTAGAGGATTTAAGCAATATGCTCTTGGTCCCATCCTCATGCTCTATGCTCAAAAGTCTCTAAGAGGTTTGGAAGCCTTTGGGAAGGGAAGAAAGAAAATTGAGCCCAAGCAAGAACATGAAAAGAGGGTTGTGTTAGAGACCATTGTGAGCCTGCTACCTAGGGAGAGAAATGCATTGTCAGTGAGCTTCCTTTCCATGCTGCTTCGCTCTTCAATATATCTGGAGACAACAGATGCTTGCCGGCTTGATTTGGAGAAAAGGATGGCCTTACAACTCAGTCAGGCTGTTCTAGATGACCTTTTGATTCCTTCATATTCTTTTACTGGGGACACTTTGTTTGATGTGGATGCAGTCAGGAGAATCATGATGAACTACCTTGAGTATGAAGTGGAGGGAAATCATCGCCTGGGATATGGTTCAGGAGAAGAACATTTTGCTCCTCCTAACGATTTGGAGAGGGTCGGTAAGTTGATGGAGAATTACCTGGCTGAGATAGCTTCTGACCGCAACATGACTGTTTCTAAGTTCATTGGCCTTGCCGAGCTTGTTCCTGAACAATCAAGGGTCACAGAGGATGGAATGTATAGAGCAATTGATATCTTCCTCAAGGCTCATCCTAGCCTGAGTGACATGGAGCGGAAGAAAGTATGCAACCTGATGGACTGTCAGAAGCTATCTCGGGAGGCCTGTGCCCATGCAGCTCAAAACGACCGACTGCCTGTGCAAACAGTTGTGCAAGTCCTCTACTATGAGCAGCAACGCCTCCGAGAAGCCATGAATGGCAACGGAGAATCTCCTTCAGCCGCTATTATTCCTAGCAAATCACTGAGTCTATATCCAACTGATACACCCTCCTCAGATCATGAGGTCCAGAACCTGAAAAGAGAGAACCAGGACCTGAAACTTGAGCTTCTCAAACTGAAGATGAAGTTAAAGGAAATTGAGAAACCAGGTCCAGGAGTTAACAATAAGTCTACTACAATCAGCAGCCCAGCTGCAAGTAGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_19946.p1 GENE.S_Transcript_19946~~S_Transcript_19946.p1 ORF type:3prime_partial len:542 (+),score=114.77,NPH3|PF03000.10|7.5e+03,NPH3|PF03000.10|7e-84,BTB|PF00651.27|6.1e-08 S_Transcript_19946:775-2397(+)
MIFSQEIPSDVTIQIGDVSFSLHKFPLVSKSGRIRKLLSECNSTDLSVIELSDIPGGPEAFEVAAKFCYGINFEISTENIAMLRCVAEYLEMTEDNAVGNLIGRAEAYLNEVALKSLSTCVSVLLASENLLPMAEQIKLVGRCIDAIAYLACKDSQFSGTSRAEAGIEGGNSSLVPQQKPIVDWWAEDVTMLRIDMFQRVLIAMTARGFKQYALGPILMLYAQKSLRGLEAFGKGRKKIEPKQEHEKRVVLETIVSLLPRERNALSVSFLSMLLRSSIYLETTDACRLDLEKRMALQLSQAVLDDLLIPSYSFTGDTLFDVDAVRRIMMNYLEYEVEGNHRLGYGSGEEHFAPPNDLERVGKLMENYLAEIASDRNMTVSKFIGLAELVPEQSRVTEDGMYRAIDIFLKAHPSLSDMERKKVCNLMDCQKLSREACAHAAQNDRLPVQTVVQVLYYEQQRLREAMNGNGESPSAAIIPSKSLSLYPTDTPSSDHEVQNLKRENQDLKLELLKLKMKLKEIEKPGPGVNNKSTTISSPAASS

Click here to download the sequence:
Link to NCBI Protein BLAST